RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ZNF48Q96MX3 618 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TCHPQ9BT92 498 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 FUNDC2Q9BWH2 189 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 EGLN1Q9GZT9 426 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 RMND5AQ9H871 391 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ACTR8Q9H981 624 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 TBC1D13Q9NVG8 400 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 PLEK2Q9NYT0 353 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ERVK-18Q9QC07 812 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 BCAP29Q9UHQ4 241 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF580Q9UK33 172 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 PILRBQ9UKJ0 227 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 PILRAQ9UKJ1 303 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 PRDM4Q9UKN5 801 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 GRID1Q9ULK0 1009 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 SATB2Q9UPW6 733 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 RIPK3Q9Y572 518 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 ABCC4O15439 1325 aa3.5□□□□□ -1.85
TRAPPC13-208ENST00000505553 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 SRRM3A6NNA2 597 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCDC169A6NNP5 214 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 UBXN8O00124 270 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 TBX19O60806 448 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 CSO75390 466 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 CDK2AP2O75956 126 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 NR3C1P04150 777 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 GLRA2P23416 452 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 CTNNA2P26232 953 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 NR4A2P43354 598 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF132P52740 706 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 DVL1P1P54792 670 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 SPIBQ01892 262 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 HSPA14Q0VDF9 509 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 CHIT1Q13231 466 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 GPM6BQ13491 265 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 KEAP1Q14145 624 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 BTG3Q14201 252 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 XKR6Q5GH73 641 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 XKR3Q5GH77 459 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 ARHGEF16Q5VV41 709 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 LYPLAL1Q5VWZ2 237 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 ARHGAP17Q68EM7 881 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 SULT1C3Q6IMI6 304 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF852Q6ZMS4 543 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 C17orf107Q6ZR85 190 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 RFPL4BQ6ZWI9 263 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 TUBA1AQ71U36 451 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 FCRLAQ7L513 359 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 BNIPLQ7Z465 357 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 TRMT11Q7Z4G4 463 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 VPS36Q86VN1 386 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 IQCF1Q8N6M8 205 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 STKLD1Q8NE28 680 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR52M1Q8NGK5 317 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR4L1Q8NH43 312 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 OLIG1Q8TAK6 271 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 GIPC3Q8TF64 312 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 PHYHIPQ92561 330 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 TUBA1CQ9BQE3 449 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 RHNO1Q9BSD3 238 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 PITPNM3Q9BZ71 974 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 RAB33BQ9H082 229 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 VPS33BQ9H267 617 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 UPF2Q9HAU5 1272 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 YAE1D1Q9NRH1 226 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR6C2Q9NZP2 312 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF319Q9P2F9 582 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 EPHA6Q9UF33 1036 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 MRTO4Q9UKD2 239 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 ELF5Q9UKW6 265 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 SMC3Q9UQE7 1217 aa3.49□□□□□ -1.85
TRAPPC13-208ENST00000505553 SAA2-SAA4A0A096LPE2 208 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 A0A1B0GUL7 405 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCSO14618 274 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 CSDE1O75534 798 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 PRAMEF12O95522 483 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 TXNDC12O95881 172 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 PRKAR1AP10644 381 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 CEACAM1P13688 526 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 GP9P14770 177 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 LIFP15018 202 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 EZRP15311 586 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 ACKR3P25106 362 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 DPP4P27487 766 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 HTR2AP28223 471 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 GJB2P29033 226 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 PBLDP30039 288 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 PRDX2P32119 198 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR1D2P34982 312 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 SULT1E1P49888 294 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 NLRP11P59045 1033 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 SNTB2Q13425 540 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 DRP2Q13474 957 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 SQLEQ14534 574 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 MEF2DQ14814 521 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 EXOSC7Q15024 291 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 MAJINQ3KP22 176 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 AGKQ53H12 422 aa3.48□□□□□ -1.85
TRAPPC13-208ENST00000505553 PLPP4Q5VZY2 271 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms