RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 C6orf163Q5TEZ5 329 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ABHD17BQ5VST6 288 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SH2D5Q6ZV89 423 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 GPR180Q86V85 440 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 TRIM42Q8IWZ5 723 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 CA13Q8N1Q1 262 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 TMEM151AQ8N4L1 468 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ACOT4Q8N9L9 421 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 BANPQ8N9N5 519 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 OR4F6Q8NGB9 312 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 EPS8L3Q8TE67 593 aaKnown RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 RBM18Q96H35 190 aaKnown RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 CRELD1Q96HD1 420 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SH3GL2Q99962 352 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 RNF32Q9H0A6 362 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 DDX31Q9H8H2 851 aaKnown RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 MMP25Q9NPA2 562 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 PRDM7Q9NQW5 492 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF358Q9NW07 568 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 HCN3Q9P1Z3 774 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 CLCA3PQ9Y6N3 262 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 FER1L5A0AVI2 2057 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 COL6A6A6NMZ7 2263 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SCN3AQ9NY46 2000 aa9.27□□□□□ -0.92
NR1I3-220ENST00000505005 CCDC88CQ9P219 2028 aa9.27□□□□□ -0.92
NR1I3-220ENST00000505005 A0A1W2PPM1 405 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 TCRBV16S1A1N1A0A5B0 115 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 C1orf226A1L170 272 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 FCHO1O14526 889 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 OR7A17O14581 309 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 NPHS1O60500 1241 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 FURINP09958 794 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 UROSP10746 265 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 NEFHP12036 1026 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 CD22P20273 847 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 GRK2P25098 689 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 CLCN2P51788 898 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 NAGLUP54802 743 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 LIM2P55344 173 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 PSPHP78330 225 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 TRAF3Q13114 568 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 SLAMF1Q13291 335 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 DDX39BQ13838 428 aaKnown RBP9.27□□□□□ -0.93
NR1I3-220ENST00000505005 HEPACAMQ14CZ8 416 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 ELAVL1Q15717 326 aaKnown RBP9.27□□□□□ -0.93
NR1I3-220ENST00000505005 INAQ16352 499 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 MEP1AQ16819 746 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 IMPG1Q17R60 797 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 CEP85LQ5SZL2 805 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 B3GNTL1Q67FW5 361 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-220ENST00000505005 RNF165Q6ZSG1 346 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 PDSS2Q86YH6 399 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 FAM9CQ8IZT9 166 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 CCNYL1Q8N7R7 359 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 MORN4Q8NDC4 146 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 OR5L2Q8NGL0 311 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 OR14A16Q8NHC5 309 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 PPP1R14CQ8TAE6 165 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 MOCOSQ96EN8 888 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 THOC3Q96J01 351 aaKnown RBP9.27□□□□□ -0.93
NR1I3-220ENST00000505005 ZIM3Q96PE6 472 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 F2RL3Q96RI0 385 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 MTERF1Q99551 399 aaKnown RBP9.27□□□□□ -0.93
NR1I3-220ENST00000505005 SPNS1Q9H2V7 528 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 RPF2Q9H7B2 306 aaKnown RBP9.27□□□□□ -0.93
NR1I3-220ENST00000505005 MID1IP1Q9NPA3 183 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 ADAP2Q9NPF8 381 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 SLAMF7Q9NQ25 335 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 COPS7AQ9UBW8 275 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 MAPRE3Q9UPY8 281 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 RNF11Q9Y3C5 154 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 PCDHGB6Q9Y5F9 930 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 NUP210LQ5VU65 1888 aa9.27□□□□□ -0.93
NR1I3-220ENST00000505005 SLC28A1O00337 649 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 RGS14O43566 566 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 B4GALT2O60909 372 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 CNOT3O75175 753 aaKnown RBP9.26□□□□□ -0.93
NR1I3-220ENST00000505005 FGF4P08620 206 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 PRR35P0CG20 571 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 COX6A1P12074 109 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 DRD2P14416 443 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 HNRNPH1P31943 449 aaKnown RBP9.26□□□□□ -0.93
NR1I3-220ENST00000505005 RPS13P62277 151 aaKnown RBP9.26□□□□□ -0.93
NR1I3-220ENST00000505005 MAT1AQ00266 395 aaKnown RBP9.26□□□□□ -0.93
NR1I3-220ENST00000505005 PLIN5Q00G26 463 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 RHAGQ02094 409 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 ACSM2AQ08AH3 577 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 CHAF1BQ13112 559 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 MFAP5Q13361 173 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 LY6DQ14210 128 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 TLR1Q15399 786 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 BTBD16Q32M84 506 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 UNC50Q53HI1 259 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 SFT2D3Q587I9 215 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 FBXO48Q5FWF7 155 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 CCNYL2Q5T2Q4 361 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 ACSM2BQ68CK6 577 aa9.26□□□□□ -0.93
NR1I3-220ENST00000505005 RPUSD3Q6P087 351 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms