RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 RAB3IL1Q8TBN0 382 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 ZNF75CPQ92670 426 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-203ENST00000474384 OR1F2PQ96R84 312 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 CRB3Q9BUF7 120 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 ILKAPQ9H0C8 392 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-203ENST00000474384 TUBB1Q9H4B7 451 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 LANCL2Q9NS86 450 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 KCMF1Q9P0J7 381 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 FBXW2Q9UKT8 454 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 DAPP1Q9UN19 280 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 RAP2CQ9Y3L5 183 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 SCN2AQ99250 2005 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 A0A0A6YYD5 115 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 IDSB3KWA1 339 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 KLK1P06870 262 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 LINC00032P0C843 101 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 EFNA3P52797 238 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 RAB38P57729 211 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 CDC20Q12834 499 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 CRTC2Q53ET0 693 aaPredicted RBP17.09■□□□□ 0.33
SNRPB-203ENST00000474384 SPDYAQ5MJ70 313 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 FAAH2Q6GMR7 532 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 CYP20A1Q6UW02 462 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 COMMD6Q7Z4G1 85 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 DDIASQ8IXT1 998 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 ZCCHC7Q8N3Z6 543 aaKnown RBP17.09■□□□□ 0.33
SNRPB-203ENST00000474384 C1orf52Q8N6N3 182 aaKnown RBP17.09■□□□□ 0.33
SNRPB-203ENST00000474384 ADAMTS17Q8TE56 1095 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 CHTF18Q8WVB6 975 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 TWIST2Q8WVJ9 160 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 DYDC1Q8WWB3 177 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 APIPQ96GX9 242 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 VN1R1Q9GZP7 353 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 LYRM4Q9HD34 91 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 MED4Q9NPJ6 270 aa17.09■□□□□ 0.33
SNRPB-203ENST00000474384 INTS9Q9NV88 658 aaKnown RBP17.09■□□□□ 0.33
SNRPB-203ENST00000474384 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.09■□□□□ 0.33
SNRPB-203ENST00000474384 ITPR1Q14643 2758 aa17.08■□□□□ 0.33
SNRPB-203ENST00000474384 SLC28A1O00337 649 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 CYR61O00622 381 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 PIP5K1BO14986 540 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 TMPRSS11DO60235 418 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 SNNO75324 88 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-203ENST00000474384 SNUPNO95149 360 aaKnown RBP17.08■□□□□ 0.32
SNRPB-203ENST00000474384 IGHEP01854 428 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 MMP11P24347 488 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 TPP2P29144 1249 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-203ENST00000474384 RPL14P50914 215 aaKnown RBP17.08■□□□□ 0.32
SNRPB-203ENST00000474384 HNRNPH2P55795 449 aaKnown RBP17.08■□□□□ 0.32
SNRPB-203ENST00000474384 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 CCNYL2Q5T2Q4 361 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 PAGE2Q7Z2X7 111 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 PPP1R32Q7Z5V6 425 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 GPR180Q86V85 440 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 RAB43Q86YS6 212 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 FAM47BQ8NA70 645 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 CSF3RQ99062 836 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 MESP1Q9BRJ9 268 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 SEMA3GQ9NS98 782 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 PNPOQ9NVS9 261 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 THAP1Q9NVV9 213 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 CCL27Q9Y4X3 112 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 ASB4Q9Y574 426 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 MGAQ8IWI9 3026 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 PTPRQQ9UMZ3 2332 aa17.08■□□□□ 0.32
SNRPB-203ENST00000474384 PKD1L2Q7Z442 2459 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 LOC400499M0QZD8 3231 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 ARHGAP10A1A4S6 786 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 RGS14O43566 566 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
SNRPB-203ENST00000474384 FAM58BPP0C7Q3 252 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 CPN2P22792 545 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 JAK1P23458 1154 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 HNRNPFP52597 415 aaKnown RBP17.07■□□□□ 0.32
SNRPB-203ENST00000474384 BTG2P78543 158 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 RHAGQ02094 409 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 COL28A1Q2UY09 1125 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 MRM1Q6IN84 353 aaKnown RBP17.07■□□□□ 0.32
SNRPB-203ENST00000474384 RNF165Q6ZSG1 346 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 Q6ZSR9 355 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 HOMEZQ8IX15 550 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 EFCAB3Q8N7B9 438 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 TMEM52Q8NDY8 209 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 OR2T11Q8NH01 316 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 ADAMTS18Q8TE60 1221 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 LYARQ9NX58 379 aaKnown RBP17.07■□□□□ 0.32
SNRPB-203ENST00000474384 PHF11Q9UIL8 331 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 HAO1Q9UJM8 370 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 ADAM29Q9UKF5 820 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 ATG4BQ9Y4P1 393 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 HS3ST3B1Q9Y662 390 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 SPACA6W5XKT8 324 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 NUP210LQ5VU65 1888 aa17.07■□□□□ 0.32
SNRPB-203ENST00000474384 SOCS6O14544 535 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 KLF11O14901 512 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 PROM1O43490 865 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 PRMT3O60678 531 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 ALOX12BO75342 701 aa17.06■□□□□ 0.32
SNRPB-203ENST00000474384 RSL1D1O76021 490 aaKnown RBP17.06■□□□□ 0.32
SNRPB-203ENST00000474384 RAE1P78406 368 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms