RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CLVS1Q8IUQ0 354 aaPredicted RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 SPARTQ8N0X7 666 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 MMP21Q8N119 569 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 KRT78Q8N1N4 520 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 HDDC3Q8N4P3 179 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 LINC01555Q8NAE3 123 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 C11orf65Q8NCR3 313 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 SMPDL3AQ92484 453 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 SNX19Q92543 992 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 SGCDQ92629 289 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 EDAQ92838 391 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 FGF14Q92915 247 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 MAL2Q969L2 176 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 TAMM41Q96BW9 452 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 C12orf43Q96C57 262 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 PPCDCQ96CD2 204 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 ZNF764Q96H86 408 aaPredicted RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 NECTIN4Q96NY8 510 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 EPYCQ99645 322 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 PITX2Q99697 317 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 KXD1Q9BQD3 176 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 SLC35A5Q9BS91 424 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 TIMM29Q9BSF4 260 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 DOHHQ9BU89 302 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 SORBS1Q9BX66 1292 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 C1QTNF2Q9BXJ5 285 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 PITHD1Q9GZP4 211 aaPredicted RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 PCBD2Q9H0N5 130 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 TRIT1Q9H3H1 467 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 WDR26Q9H7D7 661 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 LIN28AQ9H9Z2 209 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 CXorf21Q9HAI6 301 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 SLAMF7Q9NQ25 335 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 PAK1IP1Q9NWT1 392 aaPredicted RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 CLDND1Q9NY35 253 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 TAS2R9Q9NYW1 312 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 TAC3Q9UHF0 121 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 ACSL6Q9UKU0 697 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 ACSL5Q9ULC5 683 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 NDRG4Q9ULP0 352 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 CDC14AQ9UNH5 594 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 FAF1Q9UNN5 650 aaPredicted RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 SLC17A4Q9Y2C5 497 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 WDR37Q9Y2I8 494 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 WBP11Q9Y2W2 641 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 OR1A2Q9Y585 309 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 CFAP20Q9Y6A4 193 aaKnown RBP6.12□□□□□ -1.43
SPEN-204ENST00000471538 HSPE1-MOB4S4R3N1 261 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 U3KQV3 271 aa6.12□□□□□ -1.43
SPEN-204ENST00000471538 IGKV1-8A0A0C4DH67 115 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 A0A1W2PP55 124 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 A0A1W2PRB8 838 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 TMEM221A6NGB7 291 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 H3BMQ9 156 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 M0R296 226 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 SLC1A7O00341 560 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 BCKDKO14874 412 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 MBTPS2O43462 519 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 SUV39H1O43463 412 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PLRG1O43660 514 aaKnown RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 PRICKLE3O43900 615 aaPredicted RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 UGT2B11O75310 529 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PCDH8O95206 1070 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 ATE1O95260 518 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 RECKO95980 971 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 C9P02748 559 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 NTRK1P04629 796 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CEACAM5P06731 702 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CCDC159P0C7I6 412 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 ARAFP10398 606 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 LAMP2P13473 410 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 DDCP20711 480 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PCMT1P22061 227 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CXCR2P25025 360 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PSMB5P28074 263 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PKLRP30613 574 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 GDI1P31150 447 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 IGFALSP35858 605 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 TNFRSF4P43489 277 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 SOX9P48436 509 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PXNP49023 591 aaPredicted RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 GALK1P51570 392 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CCR8P51685 355 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CLCNKAP51800 687 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 PCBP4P57723 403 aaKnown RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 SELENOWP63302 87 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CSNK1G2P78368 415 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CDK5R2Q13319 367 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 RAPSNQ13702 412 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 SCARB2Q14108 478 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 RBBP5Q15291 538 aaKnown RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 SLC5A12Q1EHB4 618 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 ITPRIPL2Q3MIP1 535 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 CRB2Q5IJ48 1285 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 SAXO2Q658L1 398 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 ZNF776Q68DI1 518 aaPredicted RBP6.11□□□□□ -1.43
SPEN-204ENST00000471538 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 ASCL5Q7RTU5 278 aa6.11□□□□□ -1.43
SPEN-204ENST00000471538 UBE3DQ7Z6J8 389 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms