RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 KLHL6Q8WZ60 621 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 TMEM80Q96HE8 168 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 C1QTNF6Q9BXI9 259 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 TM6SF2Q9BZW4 377 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 RACGAP1Q9H0H5 632 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 ZNF222Q9UK12 451 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 RAB23Q9ULC3 237 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 MGAT4AQ9UM21 535 aa13.34□□□□□ -0.27
TGFBR3-204ENST00000465892 C2orf78A6NCI8 922 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 SLC22A5O76082 557 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 DDCP20711 480 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 LRRC74AQ0VAA2 488 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 MTAPQ13126 283 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 FGFBP1Q14512 234 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 SNAPC1Q16533 368 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 ANKS3Q6ZW76 656 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 PLEKHM3Q6ZWE6 761 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 GPRC5AQ8NFJ5 357 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 GATAD2BQ8WXI9 593 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 KATNB1Q9BVA0 655 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 CNOT2Q9NZN8 540 aaKnown RBP13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 FLRT1Q9NZU1 646 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 SCML2Q9UQR0 700 aa13.33□□□□□ -0.27
TGFBR3-204ENST00000465892 PDPK1O15530 556 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 CR2P20023 1033 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 PSEN2P49810 448 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 MGAT3Q09327 533 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 CHIT1Q13231 466 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 FCN2Q15485 313 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 FRG2Q64ET8 278 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 SHFQ7M4L6 423 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 GALNT11Q8NCW6 608 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 FAM46DQ8NEK8 389 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 OR4A15Q8NGL6 344 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 FRG2BQ96QU4 278 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 GTPBP2Q9BX10 602 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ANKRA2Q9H9E1 313 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 NDUFB11Q9NX14 153 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 EIF3KQ9UBQ5 218 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ZAR1LA6NP61 321 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ATP6V1G2-DDX39BF2Z307 99 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 INMT-MINDY4F8WBC2 141 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 C1SP09871 688 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 CD9P21926 228 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 MAPK1P28482 360 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 RPL9P32969 192 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ABATP80404 500 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 RHAGQ02094 409 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ZNF91Q05481 1191 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 SRSF11Q05519 484 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 CPTPQ5TA50 214 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 TYW3Q6IPR3 259 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ZNF680Q8NEM1 530 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 ZNF431Q8TF32 576 aaPredicted RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 SLC6A18Q96N87 628 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 DPCDQ9BVM2 203 aaPredicted RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 TSSK6Q9BXA6 273 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 B3GNT2Q9NY97 397 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 FTSJ1Q9UET6 329 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 CRLS1Q9UJA2 301 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 FCF1Q9Y324 198 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 PCDHB1Q9Y5F3 818 aa13.33□□□□□ -0.28
TGFBR3-204ENST00000465892 TRBV4-1A0A0J9YWV2 114 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 TLX2O43763 284 aaPredicted RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 CLDN7O95471 211 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 IGHA2P01877 340 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 AGFG1P52594 562 aaKnown RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 RAB8AP61006 207 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 TAGLNQ01995 201 aaKnown RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 BCL2L15Q5TBC7 163 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 TEX261Q6UWH6 196 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 UBE2R2Q712K3 238 aaPredicted RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 LIX1LQ8IVB5 337 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 LAS2Q8IYD9 372 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 MND1Q9BWT6 205 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 TVP23BQ9NYZ1 205 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 MBD1Q9UIS9 605 aaPredicted RBP13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 U3KQ87 197 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 PLXNA4Q9HCM2 1894 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 C17orf102A2RUQ5 167 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 SH3D21A4FU49 640 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 CASKO14936 926 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 ETV5P41161 510 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 ETV1P50549 477 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 PER3P56645 1201 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 RBBP4Q09028 425 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 SCARB2Q14108 478 aa13.32□□□□□ -0.28
TGFBR3-204ENST00000465892 GPRC6AQ5T6X5 926 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms