RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 STX16O14662 325 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 ETHE1O95571 254 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 UQCRHP07919 91 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 TSPAN8P19075 237 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 ZNF10P21506 573 aaPredicted RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 HIST1H1TP22492 207 aaPredicted RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 HPDP32754 393 aaPredicted RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 PIK3CBP42338 1070 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 RPS13P62277 151 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 TMEM35AQ53FP2 167 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 LGSNQ5TDP6 509 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 METTL2BQ6P1Q9 378 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 CLEC18BQ6UXF7 455 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 CHSY3Q70JA7 882 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 CLNKQ7Z7G1 428 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 CRLF3Q8IUI8 442 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 BEST3Q8N1M1 668 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 CLEC18CQ8NCF0 446 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 MTBPQ96DY7 904 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 CMTM7Q96FZ5 175 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 PRTFDC1Q9NRG1 225 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 FETUBQ9UGM5 382 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 MMACHCQ9Y4U1 282 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 PCDHGA11Q9Y5H2 935 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 A0A1W2PPM1 405 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 A8MT66 165 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 PLPP1O14494 284 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 UGDHO60701 494 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 SMIM24O75264 130 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 TSFMP43897 325 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 HSD17B7P56937 341 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 AP2B1P63010 937 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 SRSF11Q05519 484 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 TRAF3Q13114 568 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 SLC13A2Q13183 592 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 ZRSR2Q15696 482 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 MTFMTQ96DP5 389 aaKnown RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 ZNF717Q9BY31 904 aaPredicted RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 PRM3Q9NNZ6 103 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 SEMA4BQ9NPR2 832 aaPredicted RBP12.14□□□□□ -0.47
XRN1-203ENST00000463916 ANKRD10Q9NXR5 420 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 TSC22D4Q9Y3Q8 395 aa12.14□□□□□ -0.47
XRN1-203ENST00000463916 SAGE2PA6NJ88 616 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 MYO1DO94832 1006 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 SCELO95171 688 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 CLDN9O95484 217 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 CBX6O95503 412 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 RPS17P08708 135 aaKnown RBP12.13□□□□□ -0.47
XRN1-203ENST00000463916 PYGBP11216 843 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 SERPINB1P30740 379 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 CDH13P55290 713 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 TGM3Q08188 693 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 NR6A1Q15406 480 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 AP5B1Q2VPB7 878 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 OR4C11Q6IEV9 310 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 ZNF595Q8IYB9 648 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 APCDD1LQ8NCL9 501 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 SRFBP1Q8NEF9 429 aaKnown RBP12.13□□□□□ -0.47
XRN1-203ENST00000463916 GRHL3Q8TE85 626 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 TAAR6Q96RI8 345 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 NTMT1Q9BV86 223 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 RNF32Q9H0A6 362 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.13□□□□□ -0.47
XRN1-203ENST00000463916 LYRM4Q9HD34 91 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 PNO1Q9NRX1 252 aaKnown RBP12.13□□□□□ -0.47
XRN1-203ENST00000463916 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
XRN1-203ENST00000463916 TEKT2Q9UIF3 430 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 ESPL1Q14674 2120 aa12.13□□□□□ -0.47
XRN1-203ENST00000463916 IQANK1A0A1B0GTG1 560 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 OR5H15A6NDH6 313 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 CLDN4O14493 209 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 LDB3O75112 727 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 TNFRSF8P28908 595 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 SSR2P43308 183 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 SLCO1A2P46721 670 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 GPR143P51810 404 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 SLAMF1Q13291 335 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 SH2D5Q6ZV89 423 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 UBLCP1Q8WVY7 318 aaPredicted RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 ATP6V1E2Q96A05 226 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ZNF354BQ96LW1 612 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 SIGLEC12Q96PQ1 595 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 CDCP1Q9H5V8 836 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ZNF225Q9UK10 706 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ZNF223Q9UK11 482 aaPredicted RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 FBXW2Q9UKT8 454 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 TMCO1Q9UM00 188 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 WASHC1A8K0Z3 465 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 DLX3O60479 287 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 CTNSO60931 367 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 PRKRAO75569 313 aaKnown RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 PTX3P26022 381 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms