RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 CUL3Q13618 768 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 TRADDQ15628 312 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 DEPDC1Q5TB30 811 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 KHDRBS2Q5VWX1 349 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 SCUBE1Q8IWY4 988 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 CENPLQ8N0S6 344 aaPredicted RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 MORN4Q8NDC4 146 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 MYRIPQ8NFW9 859 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 OR7G3Q8NG95 312 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 OR8K3Q8NH51 312 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 ZNF473Q8WTR7 871 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 KCTD4Q8WVF5 259 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 MRRFQ96E11 262 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 RBM18Q96H35 190 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 SERPINI1Q99574 410 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 SLX1AQ9BQ83 275 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 UNKQ9C0B0 810 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 SPNS1Q9H2V7 528 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 MRPL46Q9H2W6 279 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 KLHL31Q9H511 634 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 RUBCNLQ9H714 662 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 LYARQ9NX58 379 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 COPS7AQ9UBW8 275 aa12.6□□□□□ -0.39
COMMD3-205ENST00000463688 ZNF490Q9ULM2 529 aaPredicted RBP12.6□□□□□ -0.39
COMMD3-205ENST00000463688 MDC1Q14676 2089 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 H3BQF6 201 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 KLRC4-KLRK1H3BQV0 150 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 SCELO95171 688 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 TNNI3P19429 210 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 TRHRP34981 398 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 CCNG1P51959 295 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 LIM2P55344 173 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 OLR1P78380 273 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 BMPR2Q13873 1038 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 GTF2H2Q13888 395 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 OR1C1Q15619 314 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 OR4C11Q6IEV9 310 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 SLC25A25Q6KCM7 469 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 GTF2H2CQ6P1K8 395 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 TIFABQ6ZNK6 161 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 CRLF3Q8IUI8 442 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 ZCCHC7Q8N3Z6 543 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 TSLPQ969D9 159 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 CCDC126Q96EE4 140 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 MS4A8Q9BY19 250 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 RBCK1Q9BYM8 510 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 IPPKQ9H8X2 491 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 PLA2G3Q9NZ20 509 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 LRFN1Q9P244 771 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 CPSF2Q9P2I0 782 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 VTI1BQ9UEU0 232 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 YARS2Q9Y2Z4 477 aaKnown RBP12.59□□□□□ -0.39
COMMD3-205ENST00000463688 FLNCQ14315 2725 aa12.59□□□□□ -0.39
COMMD3-205ENST00000463688 IGHV3-20A0A0C4DH32 117 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 GABRR3A8MPY1 467 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 MASP2O00187 686 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 MYO1DO94832 1006 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 SEMA3DO95025 777 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 ZIC2O95409 532 aaPredicted RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 OTCP00480 354 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 ALDOAP04075 364 aaKnown RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 CPN2P22792 545 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 ATP5A1P25705 553 aaKnown RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 HNRNPH1P31943 449 aaKnown RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 HLCSP50747 726 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 TUBA3CQ13748 450 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 TTC19Q6DKK2 380 aaPredicted RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 TUBA3EQ6PEY2 450 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 CYP20A1Q6UW02 462 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 HSDL2Q6YN16 418 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 BNC2Q6ZN30 1099 aaPredicted RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 SLC22A9Q8IVM8 553 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 BEST3Q8N1M1 668 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 TMEM156Q8N614 296 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 L3MBTL4Q8NA19 623 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 NOA1Q8NC60 698 aaKnown RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 CATSPER1Q8NEC5 780 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 HUS1BQ8NHY5 278 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 THAP3Q8WTV1 239 aaPredicted RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 F2RL3Q96RI0 385 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 NTMT1Q9BV86 223 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 CDCP1Q9H5V8 836 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 TRIM45Q9H8W5 580 aaPredicted RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 PRDM7Q9NQW5 492 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 PNO1Q9NRX1 252 aaKnown RBP12.58□□□□□ -0.4
COMMD3-205ENST00000463688 SEC14L3Q9UDX4 400 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 SNX6Q9UNH7 406 aa12.58□□□□□ -0.4
COMMD3-205ENST00000463688 POLEQ07864 2286 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms