RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ZNF479Q96JC4 524 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 MAGED4Q96JG8 741 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 IL17FQ96PD4 163 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 PCDHB18PQ96TA0 734 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 ZSCAN5AQ9BUG6 496 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 TPPP3Q9BW30 176 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 FUNDC2Q9BWH2 189 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 MRPL13Q9BYD1 178 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SLC26A1Q9H2B4 701 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CXXC4Q9H2H0 198 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 MTIF3Q9H2K0 278 aaKnown RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 RIBC2Q9H4K1 309 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 FNDC4Q9H6D8 234 aaPredicted RBP3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 ATP13A3Q9H7F0 1226 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 GORASP2Q9H8Y8 452 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 MARCH7Q9H992 704 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 CALHM2Q9HA72 323 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 HPS4Q9NQG7 708 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 EPHA6Q9UF33 1036 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 COLEC10Q9Y6Z7 277 aa3.72□□□□□ -1.81
HMGN3P1-201ENST00000453847 SMCHD1A6NHR9 2005 aa3.71□□□□□ -1.81
HMGN3P1-201ENST00000453847 KIF7Q2M1P5 1343 aa3.71□□□□□ -1.81
HMGN3P1-201ENST00000453847 UMODL1Q5DID0 1318 aa3.71□□□□□ -1.81
HMGN3P1-201ENST00000453847 MSGN1A6NI15 193 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 EEF2KO00418 725 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TLX2O43763 284 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 CSO75390 466 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 LRCH4O75427 683 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 CSDE1O75534 798 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF821O75541 412 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 SNX4O95219 450 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 EML2O95834 649 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 GOT2P00505 430 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 SERPINF2P08697 491 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PLA2G2AP14555 144 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 EZRP15311 586 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 HNRNPA2B1P22626 353 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 GLRA1P23415 457 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PAX7P23759 505 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 CDC25AP30304 524 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 CEACAM8P31997 349 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PTGER3P43115 390 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 HOXA1P49639 335 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 KCNK10P57789 538 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 MYL7Q01449 175 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 HSF2Q03933 536 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 GPR17Q13304 367 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 SNX1Q13596 522 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TRIM29Q14134 588 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 MEF2DQ14814 521 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 OR1C1Q15619 314 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 ANKRD55Q3KP44 614 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 USH1GQ495M9 461 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 C9orf50Q5SZB4 431 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 LYPLAL1Q5VWZ2 237 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 C9orf57Q5W0N0 161 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PRSS57Q6UWY2 283 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 LEKR1Q6ZMV7 388 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 G2E3Q7L622 706 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 SLC22A16Q86VW1 577 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 FADS6Q8N9I5 356 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TRIM58Q8NG06 486 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PHYHIPQ92561 330 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMEM45BQ96B21 275 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 NSL1Q96IY1 281 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TESK2Q96S53 571 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 IWS1Q96ST2 819 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 UBAC1Q9BSL1 405 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 EDEM2Q9BV94 578 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMEM117Q9H0C3 514 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 RMND5AQ9H871 391 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 EVA1AQ9H8M9 152 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 VAT1LQ9HCJ6 419 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PLEK2Q9NYT0 353 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 VPS54Q9P1Q0 977 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF624Q9P2J8 865 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 MAN1B1Q9UKM7 699 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 FAF1Q9UNN5 650 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 DIMT1Q9UNQ2 313 aaKnown RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 PARD3Q8TEW0 1356 aa3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 TRIP12Q14669 1992 aaPredicted RBP3.71□□□□□ -1.82
HMGN3P1-201ENST00000453847 A0A087WUV0 522 aaPredicted RBP3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 IGHV4-61A0A0C4DH41 118 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 FAM230AA0A1W2PPH8 454 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 RNF222A6NCQ9 220 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 ANHXE9PGG2 379 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 LMO7DNF2Z398 122 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 CHEK1O14757 476 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 GPRIN2O60269 458 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 ECE2O60344 883 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 KRT33AO76009 404 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 HPRP00739 348 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 IGHV4-59P01825 116 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 IQCF3P0C7M6 154 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 THRBP10828 461 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 CLUP10909 449 aa3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 FBLP22087 321 aaKnown RBP3.7□□□□□ -1.82
HMGN3P1-201ENST00000453847 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms