RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SLC5A8Q8N695 610 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 THAP8Q8NA92 274 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 NGDNQ8NEJ9 315 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 MYRIPQ8NFW9 859 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 FBXO25Q8TCJ0 367 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CD99L2Q8TCZ2 262 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCHCR1Q8TD31 782 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 OTUD7AQ8TE49 926 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ARHGAP45Q92619 1136 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 RDH5Q92781 318 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PMM1Q92871 262 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 LHX4Q969G2 390 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 MARC2Q969Z3 335 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CDCA5Q96FF9 252 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 LINC00526Q96FQ7 95 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 C3orf30Q96M34 536 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 FRG2BQ96QU4 278 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRMT1Q99873 361 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 BAG1Q99933 345 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ANKRD60Q9BZ19 345 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 TTYH3Q9C0H2 523 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CSTL1Q9H114 145 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 S1PR5Q9H228 398 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 KIF9Q9HAQ2 790 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 USP29Q9HBJ7 922 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 IL1RAPL2Q9NP60 686 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PNRC2Q9NPJ4 139 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 VPS45Q9NRW7 570 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRMT7Q9NVM4 692 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLHL28Q9NXS3 571 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CNOT2Q9NZN8 540 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 SEPT10Q9P0V9 454 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ARMCX1Q9P291 453 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 NRBP1Q9UHY1 535 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GLS2Q9UI32 602 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 VAX2Q9UIW0 290 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLHL21Q9UJP4 597 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 NDRG4Q9ULP0 352 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 UBQLN1Q9UMX0 589 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PPP1R3CQ9UQK1 317 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 RNF6Q9Y252 685 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIGLEC7Q9Y286 467 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 YARS2Q9Y2Z4 477 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 R4GN34 69 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ADAMTS13Q76LX8 1427 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 BIVM-ERCC5R4GMW8 1640 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ANKRD12Q6UB98 2062 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 EMSYQ7Z589 1322 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SCN2AQ99250 2005 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV3-64A0A075B6Q5 118 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 A0A087WTM6 91 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV3-64DA0A0J9YX35 117 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMEM89A2RUT3 159 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR6C70A6NIJ9 312 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 GOLGA8AA7E2F4 631 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RNF212BA8MTL3 300 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 C11orf94C9JXX5 98 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 M0R3E3 92 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PLOD2O00469 737 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 XKRYO14609 159 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 KDM1AO60341 852 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 KHDRBS3O75525 346 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CDC123O75794 336 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 VAMP5O95183 116 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRATO95237 230 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ATP1B1P05026 303 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 LINC00869P0C866 280 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 INAFM2P0DMQ5 153 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 XRCC6P12956 609 aaKnown RBP eCLIP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 AKR1A1P14550 325 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 GLULP15104 373 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 ITGA2P17301 1181 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RCC1P18754 421 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 S1PR1P21453 382 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV1-2P23083 117 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CALRP27797 417 aaKnown RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MIPP30301 263 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 GPR4P46093 362 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CLCNKAP51800 687 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 NDST1P52848 882 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC25A1P53007 311 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 NR1H2P55055 460 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 DIO3P55073 304 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 FOXA3P55318 350 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCNK10P57789 538 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 NKX6-1P78426 367 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PITPNAQ00169 270 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 TIAL1Q01085 375 aaKnown RBP eCLIP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 CYP4A11Q02928 519 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 MFGE8Q08431 387 aaPredicted RBP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 PMPCAQ10713 525 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 GRIK3Q13003 919 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SEMA3BQ13214 749 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 SRSF9Q13242 221 aaKnown RBP eCLIP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 EFTUD2Q15029 972 aaKnown RBP eCLIP-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 NNATQ16517 81 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 RPE65Q16518 533 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 TYSND1Q2T9J0 566 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 EPC2Q52LR7 807 aa-1.84□□□□□ -2.7
RNU4-88P-201ENST00000411220 COBLL1Q53SF7 1204 aa-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms