RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SOX9P48436 509 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GSTM4Q03013 218 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 QPCTQ16769 361 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 IER5LQ5T953 404 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 NKAIN2Q5VXU1 208 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ARCQ7LC44 396 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ULBP3Q9BZM4 244 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TTYH1Q9H313 450 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 OR51I1Q9H343 314 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ESR1P03372 595 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 RAC2P15153 192 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 EEFSECP57772 596 aaKnown RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 DCDC1P59894 354 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 GOLGA7Q7Z5G4 137 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CSNK1A1LQ8N752 337 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MINDY3Q9H8M7 445 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TMPRSS11EQ9UL52 423 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MST1RQ04912 1400 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TCRBV7S3A2A0A539 114 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 ALDH16A1Q8IZ83 802 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MFRPQ9BY79 579 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TRNAU1APQ9NX07 287 aaKnown RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CCDC59Q9P031 241 aaKnown RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CDH22Q9UJ99 828 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 EVPLQ92817 2033 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CLCA1A8K7I4 914 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 F5H5K5 113 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 IL1RNP18510 177 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PTPN6P29350 595 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 DSC3Q14574 896 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CHRFAM7AQ494W8 412 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 HMBOX1Q6NT76 420 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 IRF2BP2Q7Z5L9 587 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TICAM1Q8IUC6 712 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 OR51A7Q8NH64 312 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 NECAB3Q96P71 396 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 ERMAPQ96PL5 475 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 RBP7Q96R05 134 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PAAF1Q9BRP4 392 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 NAA11Q9BSU3 229 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 FKRPQ9H9S5 495 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PLEKHA3Q9HB20 300 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 DTLQ9NZJ0 730 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 A0A0U1RQS6 177 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MTMR11A4FU01 709 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PDLIM1O00151 329 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MAN2B1O00754 1011 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 GDF1P27539 372 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PITPNAQ00169 270 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PLXDC1Q8IUK5 500 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 NUP43Q8NFH3 380 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CWH43Q9H720 699 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 ALG5Q9Y673 324 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 FER1L6Q2WGJ9 1857 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TSPAN6O43657 245 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 SLC2A5P22732 501 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TGM1P22735 817 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 GLP1RP43220 463 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 TAS2R39P59534 338 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF805Q5CZA5 627 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MYLIPQ8WY64 445 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 HLA-CQ95604 372 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CRB3Q9BUF7 120 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 SLC6A16Q9GZN6 736 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 FLRT1Q9NZU1 646 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 POLR1CO15160 346 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 AP1G1O43747 822 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 RAB4AP20338 218 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 APLNRP35414 380 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 POU6F2P78424 691 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 RUNX3Q13761 415 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 MS4A13Q5J8X5 152 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 FRG2Q64ET8 278 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 WDR53Q7Z5U6 358 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 OR4F6Q8NGB9 312 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 FRG2BQ96QU4 278 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 LRRC19Q9H756 370 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 KANTRA0A1W2PQU2 76 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 SOD2P04179 222 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 LCKP06239 509 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 ATF4P18848 351 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PGGT1BP53609 377 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 SHC2P98077 582 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 RAB12Q6IQ22 244 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 Q6ZSR6 202 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 CILP2Q8IUL8 1156 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 HM13Q8TCT9 377 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 AP1S3Q96PC3 154 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 ACTR6Q9GZN1 396 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 NMUR2Q9GZQ4 415 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 PNPLA3Q9NST1 481 aa8.1□□□□□ -1.11
SCN9A-203ENST00000409672 HHLA1C9JL84 531 aa8.09□□□□□ -1.11
SCN9A-203ENST00000409672 TGM5O43548 720 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms