RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 TAS2R9Q9NYW1 312 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 CCDC182A6NF36 153 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 CCL16O15467 120 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 SLITRK5O94991 958 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 POLR2EP19388 210 aaKnown RBP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 CHMP24386 653 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 SSTR4P31391 388 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 TIE1P35590 1138 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 CSNK1DP48730 415 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 TMEM115Q12893 351 aaPredicted RBP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 GRHL2Q6ISB3 625 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 PITX2Q99697 317 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 YIPF4Q9BSR8 244 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 MYL12AP19105 171 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 XKP51811 444 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 NKX3-2P78367 333 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 CD83Q01151 205 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 NCF4Q15080 339 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 TPGS2Q68CL5 300 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 LINC00299Q6ZSB3 139 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 ZNF367Q7RTV3 350 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 CD99L2Q8TCZ2 262 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 MTERF3Q96E29 417 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 SAMD11Q96NU1 681 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 OR4K3Q96R72 315 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 ELAC1Q9H777 363 aaKnown RBP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 BTNL2Q9UIR0 455 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 PADI2Q9Y2J8 665 aa12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 SPIN1Q9Y657 262 aaPredicted RBP12.9□□□□□ -0.34
RPGRIP1-202ENST00000400017 LEFTY2O00292 366 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 PSMA3P25788 255 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 SPHARQ15513 63 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 DUSP7Q16829 419 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 CDKL4Q5MAI5 379 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 FAM46DQ8NEK8 389 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 OR52N2Q8NGI0 321 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 FBLIM1Q8WUP2 373 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 KLHL6Q8WZ60 621 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 SLC35B4Q969S0 331 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 NEDD4LQ96PU5 975 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 PTPRDP23468 1912 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 KMOO15229 486 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 NR2F1P10589 423 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 PTNP21246 168 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 IMPA1P29218 277 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 RORCP51449 518 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 TBRG1Q3YBR2 411 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 ZDHHC20Q5W0Z9 365 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 FRMPD2BQ6IN97 320 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 KLHL17Q6TDP4 642 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 C9orf43Q8TAL5 461 aaPredicted RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 FIBINQ8TAL6 211 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 TMCO6Q96DC7 493 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 MAPKAP1Q9BPZ7 522 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 UCK2Q9BZX2 261 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 COMMD3Q9UBI1 195 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 MOSPD1Q9UJG1 213 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 MAPRE3Q9UPY8 281 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 BACE2Q9Y5Z0 518 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 GFYI3L273 518 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 AP3D1O14617 1153 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 NME6O75414 186 aaPredicted RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 BUD31P41223 144 aaPredicted RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 MAPK12P53778 367 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 ZNF362Q5T0B9 420 aaPredicted RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 LAX1Q8IWV1 398 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 TXNDC15Q96J42 360 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 GABARAPL3Q9BY60 117 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 MOV10Q9HCE1 1003 aaKnown RBP12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 GIMAP4Q9NUV9 329 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
RPGRIP1-202ENST00000400017 NLRC5Q86WI3 1866 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 TRBV4-1A0A0J9YWV2 114 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 FABP12A6NFH5 140 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 ALPPL2P10696 532 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 CD72P21854 359 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 PTX3P26022 381 aaPredicted RBP12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 HOXD10P28358 340 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 UGT2B10P36537 528 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 SNAPC1Q16533 368 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 ZMAT1Q5H9K5 638 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 PLAG1Q6DJT9 500 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 ZFP41Q8N8Y5 198 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 RASGEF1AQ8N9B8 481 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 WDR20Q8TBZ3 569 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 TMPRSS11EQ9UL52 423 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 SLC16A5O15375 505 aa12.88□□□□□ -0.35
RPGRIP1-202ENST00000400017 ERAL1O75616 437 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms