RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ANHXE9PGG2 379 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 OGTO15294 1046 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 ECE2O60344 883 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 KHDRBS3O75525 346 aaKnown RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 TXNDC12O95881 172 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 CALCAP01258 141 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 HEXBP07686 556 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 SFTPBP07988 381 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 ARF4P18085 180 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 CASQ1P31415 396 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 HSPA1LP34931 641 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 TDO2P48775 406 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 KCNJ10P78508 379 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCZ1BP86790 482 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCZ1P86791 482 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 SPP2Q13103 211 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 DPYSQ14117 519 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 WSCD2Q2TBF2 565 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 GTDC1Q4AE62 458 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 SPANXN4Q5MJ08 99 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 ATP1A1-AS1Q5TC04 95 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 SNRNP48Q6IEG0 339 aaKnown RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC26A9Q7LBE3 791 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 DND1Q8IYX4 353 aaKnown RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCDC185Q8N715 623 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 RNF148Q8N7C7 305 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR5AP2Q8NGF4 316 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNRF4Q8WWF5 429 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 RAB39BQ96DA2 213 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 ERGIC2Q96RQ1 377 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 PCDHB18PQ96TA0 734 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 AGPAT1Q99943 283 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 TDRD1Q9BXT4 1180 aaKnown RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 RAB17Q9H0T7 212 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 GANQ9H2C0 597 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 POLE3Q9NRF9 147 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF319Q9P2F9 582 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 DBF4Q9UBU7 674 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 KCNG2Q9UJ96 466 aa4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 MRPS2Q9Y399 296 aaKnown RBP4.38□□□□□ -1.71
HMGB1P10-201ENST00000395823 A0A1W2PR80 420 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 SH3PXD2BA1X283 911 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 FAM172BPA6NC97 362 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 F8WDY8 70 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 BMPR1BO00238 502 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF195O14628 629 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 NME2P1O60361 137 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 DIRAS3O95661 229 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 NCF1P14598 390 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 GPX3P22352 226 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 AADACP22760 399 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 CTNNA2P26232 953 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 PTPN4P29074 926 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 CCND2P30279 289 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 STIP1P31948 543 aaKnown RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 TKTL1P51854 596 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 XGP55808 180 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 BACE1P56817 501 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 SLC26A5P58743 744 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 NLRP11P59045 1033 aaKnown RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 IRX4P78413 519 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 FUT7Q11130 342 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 SGCGQ13326 291 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 MEF2DQ14814 521 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 FGD3Q5JSP0 725 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 LDLRAP1Q5SW96 308 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 RAET1GQ6H3X3 334 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 CAPN13Q6MZZ7 669 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 IRGCQ6NXR0 463 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 MEX3BQ6ZN04 569 aaKnown RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 AMZ2Q86W34 360 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 CACUL1Q86Y37 369 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 APLFQ8IW19 511 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 ZNF540Q8NDQ6 660 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 SUSD6Q92537 303 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 AZIN2Q96A70 460 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 NKX3-1Q99801 234 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 ECT2Q9H8V3 914 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 PLEK2Q9NYT0 353 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 ENTPD4Q9Y227 616 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 IKBKGQ9Y6K9 419 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 AP1M2Q9Y6Q5 423 aa4.37□□□□□ -1.71
HMGB1P10-201ENST00000395823 SIGLEC5O15389 551 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 B4GAT1O43505 415 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 LANCL1O43813 399 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 SSX5O60225 188 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 KRT36O76013 467 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 AP2A2O94973 939 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 OR6A2O95222 327 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 SYNGR4O95473 234 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 IGHDP01880 384 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 SERPINF2P08697 491 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 PRSS56P0CW18 603 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 TPBGLP0DKB5 382 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 GLRA1P23415 457 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 GEMP55040 296 aa4.36□□□□□ -1.71
HMGB1P10-201ENST00000395823 EFTUD2Q15029 972 aaKnown RBP eCLIP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms