RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 CHAF1BQ13112 559 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 AIMP2Q13155 320 aaKnown RBP11.28□□□□□ -0.6
CLIC1-207ENST00000375780 DDX39BQ13838 428 aaKnown RBP11.28□□□□□ -0.6
CLIC1-207ENST00000375780 RCN2Q14257 317 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 ZRSR2Q15696 482 aaKnown RBP11.28□□□□□ -0.6
CLIC1-207ENST00000375780 MINDY4Q4G0A6 757 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 SPDYAQ5MJ70 313 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 MFSD4BQ5TF39 518 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 ABHD17CQ6PCB6 329 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 KIRREL2Q6UWL6 708 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 TMEM151BQ8IW70 566 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 TRIM42Q8IWZ5 723 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 FITM2Q8N6M3 262 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 OR11G2Q8NGC1 345 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 OR5T3Q8NGG3 340 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 HUS1BQ8NHY5 278 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 RAB3IL1Q8TBN0 382 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 PEX11GQ96HA9 241 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 SERINC2Q96SA4 455 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 TBCDQ9BTW9 1192 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 TRIM55Q9BYV6 548 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 VN1R1Q9GZP7 353 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 SLC25A18Q9H1K4 315 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 DMRT3Q9NQL9 472 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 C19orf25Q9UFG5 118 aaPredicted RBP11.28□□□□□ -0.6
CLIC1-207ENST00000375780 FBXL4Q9UKA2 621 aa11.28□□□□□ -0.6
CLIC1-207ENST00000375780 BOD1L1Q8NFC6 3051 aa11.27□□□□□ -0.6
CLIC1-207ENST00000375780 FOXE1O00358 373 aaPredicted RBP11.27□□□□□ -0.61
CLIC1-207ENST00000375780 ALOX12BO75342 701 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 JRKO75564 520 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 CEACAM4O75871 244 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 DCTN3O75935 186 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 DNAJB5O75953 348 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 B3GALT4O96024 378 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TGFB1P01137 390 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 C8orf89P0DMQ9 161 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TSFMP43897 325 aaKnown RBP11.27□□□□□ -0.61
CLIC1-207ENST00000375780 CDH13P55290 713 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 OLR1P78380 273 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 DEPDC1Q5TB30 811 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 KHDRBS2Q5VWX1 349 aaKnown RBP11.27□□□□□ -0.61
CLIC1-207ENST00000375780 FRG2Q64ET8 278 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 ATG16L1Q676U5 607 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TMEM205Q6UW68 189 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 OR4F6Q8NGB9 312 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 ABHD17AQ96GS6 310 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 CDK15Q96Q40 435 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 FRG2BQ96QU4 278 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 F2RL3Q96RI0 385 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 ZNF382Q96SR6 550 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 MTERF1Q99551 399 aaKnown RBP11.27□□□□□ -0.61
CLIC1-207ENST00000375780 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 ZNF395Q9H8N7 513 aaPredicted RBP11.27□□□□□ -0.61
CLIC1-207ENST00000375780 RIC8BQ9NVN3 520 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 OXSMQ9NWU1 459 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TRPS1Q9UHF7 1281 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 PCDHGB7Q9Y5F8 929 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 CNTRLQ7Z7A1 2325 aa11.27□□□□□ -0.61
CLIC1-207ENST00000375780 TNRC6AQ8NDV7 1962 aaKnown RBP11.26□□□□□ -0.61
CLIC1-207ENST00000375780 LOC102723996A0A087X1L8 192 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 A0A0G2JN53 185 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 SNNO75324 88 aaPredicted RBP11.26□□□□□ -0.61
CLIC1-207ENST00000375780 SCELO95171 688 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 TGDSO95455 350 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 HPP00738 406 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 SERPINE1P05121 402 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 PTX3P26022 381 aaPredicted RBP11.26□□□□□ -0.61
CLIC1-207ENST00000375780 ARRB2P32121 409 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 CCL11P51671 97 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 RAP1GDS1P52306 607 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 SOX8P57073 446 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 DNAJB13P59910 316 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 AP2B1P63010 937 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 OCRLQ01968 901 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 LCP2Q13094 533 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 CUL3Q13618 768 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 AP5B1Q2VPB7 878 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 UNC50Q53HI1 259 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 IRAK1BP1Q5VVH5 260 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 QSOX2Q6ZRP7 698 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 CA13Q8N1Q1 262 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 PLPP5Q8NEB5 264 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 PPP1R14CQ8TAE6 165 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 TRPC4APQ8TEL6 797 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 RGMAQ96B86 450 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 THOC1Q96FV9 657 aaKnown RBP11.26□□□□□ -0.61
CLIC1-207ENST00000375780 RBCK1Q9BYM8 510 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 C20orf27Q9GZN8 174 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 ELOVL6Q9H5J4 265 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 LANCL2Q9NS86 450 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 GPR83Q9NYM4 423 aa11.26□□□□□ -0.61
CLIC1-207ENST00000375780 SNX6Q9UNH7 406 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms