RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ABHD13Q7L211 337 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF438Q7Z4V0 828 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ALPK1Q96QP1 1244 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 A8MU76 341 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GMDSO60547 372 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CXCR3P49682 368 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KIAA1024LP59773 190 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SYT6Q5T7P8 510 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF470Q6ECI4 717 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TMCO2Q7Z6W1 182 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PDZD3Q86UT5 571 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NAA40Q86UY6 237 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CMTR2Q8IYT2 770 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ELP4Q96EB1 424 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 C1QTNF3Q9BXJ4 246 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM129A0AVI4 362 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 UPK3BL1B0FP48 263 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 UPK3BL2E5RIL1 263 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ACKR2O00590 384 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SEPT4O43236 478 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PRAMEF12O95522 483 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GUSBP08236 651 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ATP6V1B2P21281 511 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZP3P21754 424 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 HOXA1P49639 335 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SERTAD2Q14140 314 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SF3B4Q15427 424 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PLAC9Q5JTB6 97 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KLHDC10Q6PID8 442 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SPICQ8N5J4 248 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TRAM1L1Q8N609 369 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MTMR4Q9NYA4 1195 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 FZD1Q9UP38 647 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MYMKA6NI61 221 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KCNK5O95279 499 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 POU3F4P49335 361 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 FBXO48Q5FWF7 155 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ELMOD2Q8IZ81 293 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KLHL36Q8N4N3 616 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OR51L1Q8NGJ5 315 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RAD9AQ99638 391 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DUS2Q9NX74 493 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CEP290O15078 2479 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SGK494L7N484 410 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DFFBO76075 338 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 THPOP40225 353 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CSHL1Q14406 222 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RBMS2Q15434 407 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KIAA0907Q7Z7F0 614 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SYVN1Q86TM6 617 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ASB5Q8WWX0 329 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ELF5Q9UKW6 265 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM72A0PK05 275 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ARGFXA6NJG6 315 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NCF1CA8MVU1 366 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CAPNS1P04632 268 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DSC1Q08554 894 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 VSIG10LQ86VR7 867 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CLIP4Q8N3C7 705 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 C2orf73Q8N5S3 287 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 COLGALT1Q8NBJ5 622 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 FCRL3Q96P31 734 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MICU1Q9BPX6 476 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ENPP5Q9UJA9 477 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CXCR6O00574 342 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ITGB7P26010 798 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GRPRP30550 384 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SOX18P35713 384 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 MBTPS1Q14703 1052 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ZBTB37Q5TC79 503 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PIWIL3Q7Z3Z3 882 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 H3BRB1 525 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 PPM1AP35813 382 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NPY4RP50391 375 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 LGALSLQ3ZCW2 172 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 EPGNQ6UW88 154 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 KCNMB4Q86W47 210 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GIMAP1Q8WWP7 306 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SAT2Q96F10 170 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TRIT1Q9H3H1 467 aaKnown RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CDCP1Q9H5V8 836 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 SPATA2Q9UM82 520 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 A0A1W2PPM1 405 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 IL1R2P27930 398 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TOB1P50616 345 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 OR51A7Q8NH64 312 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CPNE4Q96A23 557 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TRIM43Q96BQ3 446 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RAB3CQ96E17 227 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 DPEP2Q9H4A9 486 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ASB6Q9NWX5 421 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 POMT2Q9UKY4 750 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 TEX13CA0A0J9YWL9 993 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 FAM74A7A6NL05 159 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CBX6O95503 412 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 ATF4P18848 351 aaPredicted RBP3.62□□□□□ -1.83
SYNE1-207ENST00000367255 CPT2P23786 658 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 GABRR1P24046 479 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 RGS1Q08116 209 aa3.62□□□□□ -1.83
SYNE1-207ENST00000367255 NKPD1Q17RQ9 610 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms