RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CASKO14936 926 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 LRRTM2O43300 516 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 TSPAN6O43657 245 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 RPLP2P05387 115 aaKnown RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 GALTP07902 379 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 YES1P07947 543 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 MYL12AP19105 171 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 IDSP22304 550 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CXCR2P25025 360 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 XKP51811 444 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 AP1S2P56377 157 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 PTSQ03393 145 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 COL9A2Q14055 689 aaPredicted RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 SLBPQ14493 270 aaKnown RBP eCLIP7.83□□□□□ -1.16
CD46-208ENST00000367042 EIF4HQ15056 248 aaKnown RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 SSX1Q16384 188 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 DUSP7Q16829 419 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 LIPJQ5W064 366 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 MED27Q6P2C8 311 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 DNAJB7Q7Z6W7 309 aaPredicted RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 RNF180Q86T96 592 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CCDC190Q86UF4 302 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 PCSK9Q8NBP7 692 aaKnown RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 PHF21AQ96BD5 680 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 TSSK6Q9BXA6 273 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 NLNQ9BYT8 704 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CARD8Q9Y2G2 431 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 YARS2Q9Y2Z4 477 aaKnown RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CHD5Q8TDI0 1954 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 TRBV4-1A0A0J9YWV2 114 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 FAM240BA0A1B0GVZ2 78 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 PLD2O14939 933 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 PRMT3O60678 531 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CYBAP13498 195 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 PTNP21246 168 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 TIA1P31483 386 aaKnown RBP eCLIP7.83□□□□□ -1.163e-8■■■■■ 27.7
CD46-208ENST00000367042 ETV3P41162 512 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 HTR2BP41595 481 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 ALDH6A1Q02252 535 aaKnown RBP7.83□□□□□ -1.16
CD46-208ENST00000367042 PRKCZQ05513 592 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CRHR2Q13324 411 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 IL18Q14116 193 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 IRF3Q14653 427 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 CDK10Q15131 360 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 ATAT1Q5SQI0 421 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 DPY19L3Q6ZPD9 716 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 MSANTD1Q6ZTZ1 278 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 DEFB128Q7Z7B8 93 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 GLCCI1Q86VQ1 547 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 MMP21Q8N119 569 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 ZNF366Q8N895 744 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 NEIL2Q969S2 332 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 FRMD6Q96NE9 622 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 FAM83DQ9H4H8 585 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 PLCXD1Q9NUJ7 323 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 ENOPH1Q9UHY7 261 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 YIPF1Q9Y548 306 aa7.83□□□□□ -1.16
CD46-208ENST00000367042 A0A0G2JN53 185 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 FAM25AB3EWG3 89 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 FAM25CB3EWG5 89 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 FAM25GB3EWG6 89 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 CSO75390 466 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 IGHA2P01877 340 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 MAPK8P45983 427 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SLC6A12P48065 614 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 CSNK1DP48730 415 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 MANFP55145 182 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 ZNF763Q0D2J5 394 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 GGTA1PQ4G0N0 100 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 HIST2H2AA3Q6FI13 130 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 COMMD6Q7Z4G1 85 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TRAPPC5Q8IUR0 188 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 WDR48Q8TAF3 677 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TBC1D20Q96BZ9 403 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TMEM80Q96HE8 168 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SAMD11Q96NU1 681 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 OPALINQ96PE5 141 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 MAPKAP1Q9BPZ7 522 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 CLSTN3Q9BQT9 956 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 REEP4Q9H6H4 257 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TBC1D17Q9HA65 648 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ACER3Q9NUN7 267 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 MYO7AQ13402 2215 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 CKAP5Q14008 2032 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TRPM7Q96QT4 1865 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 PATJQ8NI35 1801 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SMLR1H3BR10 107 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 RTCAO00442 366 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 PLOD3O60568 738 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 NME6O75414 186 aaPredicted RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 URODP06132 367 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ADRA2AP08913 450 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SRCP12931 536 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 GABRR2P28476 465 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SDC2P34741 201 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms