RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 CHRNA6Q15825 494 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 FLYWCH1Q4VC44 716 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 TJAP1Q5JTD0 557 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 MFSD14CQ5VZR4 134 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 TRIQKQ629K1 86 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 LRRC70Q7Z2Q7 622 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 PDZD3Q86UT5 571 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 NPAS3Q8IXF0 933 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 Q8N402 240 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 OR4A15Q8NGL6 344 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 NELL2Q99435 816 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 THSD1Q9NS62 852 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 GLTPQ9NZD2 209 aa19.29■□□□□ 0.68
UBC-201ENST00000339647 LAMA2P24043 3122 aaKnown RBP19.29■□□□□ 0.68
UBC-201ENST00000339647 LOC102723532A0A0G2JNH3 316 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 FAM240BA0A1B0GVZ2 78 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 PRMT3O60678 531 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 LGI1O95970 557 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ACADMP11310 421 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 RRAS2P62070 204 aaPredicted RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 CDH18Q13634 790 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 SCARB2Q14108 478 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 RNF219Q5W0B1 726 aaPredicted RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 TMEM121BQ9BXQ6 578 aaPredicted RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 B3GAT2Q9NPZ5 323 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 B3GNT2Q9NY97 397 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 VPS29Q9UBQ0 182 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 MKI67P46013 3256 aaKnown RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 A8MVJ9 347 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 PLOD3O60568 738 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 FAM157BP0CG42 384 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 CD22P20273 847 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ITGALP20701 1170 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 SEMG2Q02383 582 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ZNF628Q5EBL2 1059 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ADNP2Q6IQ32 1131 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 DENND1CQ8IV53 801 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 CLDN22Q8N7P3 220 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 NOD1Q9Y239 953 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 NINQ8N4C6 2090 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 NPIPB8E9PQR5 432 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 TRIM3O75382 744 aaPredicted RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 CLDN7O95471 211 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ARSBP15848 533 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ZNF91Q05481 1191 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 MLLT11Q13015 90 aaPredicted RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 MAB21L1Q13394 359 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 NCF4Q15080 339 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 HSDL2Q6YN16 418 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 MACC1Q6ZN28 852 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 USP30Q70CQ3 517 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 SLC51BQ86UW2 128 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 C9orf62Q8N4C0 152 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 OR4K1Q8NGD4 311 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 LRRC20Q8TCA0 184 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 ACSL6Q9UKU0 697 aa19.28■□□□□ 0.68
UBC-201ENST00000339647 FCF1Q9Y324 198 aaKnown RBP19.28■□□□□ 0.68
UBC-201ENST00000339647 FADS2P1A8MWK0 482 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 FZD6O60353 706 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 SLC9A3P48764 834 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 ACSM2AQ08AH3 577 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 ACSM2BQ68CK6 577 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 ZNF280BQ86YH2 543 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 DUSP18Q8NEJ0 188 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 KATNB1Q9BVA0 655 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 TSSK6Q9BXA6 273 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 ARHGAP39Q9C0H5 1083 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 ANKRA2Q9H9E1 313 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 ZFYVE1Q9HBF4 777 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 PRM3Q9NNZ6 103 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 EIF3KQ9UBQ5 218 aaKnown RBP19.27■□□□□ 0.68
UBC-201ENST00000339647 BTNL2Q9UIR0 455 aa19.27■□□□□ 0.68
UBC-201ENST00000339647 LYRM1O43325 122 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 CCR7P32248 378 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 HMGA2P52926 109 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 CLDN20P56880 219 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 CYP4F8P98187 520 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 MPPE1Q53F39 396 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 CNIH2Q6PI25 160 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 TMEM145Q8NBT3 493 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 PROKR2Q8NFJ6 384 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 OR52P1PQ8NH57 321 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 LHX3Q9UBR4 397 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 CORO2BQ9UQ03 480 aa19.27■□□□□ 0.67
UBC-201ENST00000339647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.26■□□□□ 0.67
UBC-201ENST00000339647 TRBV4-1A0A0J9YWV2 114 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 PROM1O43490 865 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 ETHE1O95571 254 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 PDGFAP04085 211 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 BPIP17213 487 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 ENPP1P22413 925 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 PPIBP23284 216 aaKnown RBP19.26■□□□□ 0.67
UBC-201ENST00000339647 SLC6A12P48065 614 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 ABATP80404 500 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 HSPA14Q0VDF9 509 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 MRPL28Q13084 256 aaKnown RBP19.26■□□□□ 0.67
UBC-201ENST00000339647 ZNF177Q13360 481 aaPredicted RBP19.26■□□□□ 0.67
UBC-201ENST00000339647 MEDAGQ5VYS4 303 aa19.26■□□□□ 0.67
UBC-201ENST00000339647 ZNF770Q6IQ21 691 aaPredicted RBP19.26■□□□□ 0.67
UBC-201ENST00000339647 DDX53Q86TM3 631 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms