RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PRR14Q9BWN1 585 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 MUC13Q9H3R2 512 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 REEP4Q9H6H4 257 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ZBTB20Q9HC78 741 aaPredicted RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 DIABLOQ9NR28 239 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ERVK13-1Q9NX77 482 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TCRBV21S2A2A0A5A6 115 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 CPED1A4D0V7 1026 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 H3BNX3 289 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 EFCAB14O75071 495 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 CCNKO75909 580 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 H1F0P07305 194 aaKnown RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 C1SP09871 688 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 IFI30P13284 250 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 IL1RNP18510 177 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PTX3P26022 381 aaPredicted RBP4.59□□□□□ -1.67
UBR1-201ENST00000290650 CD83Q01151 205 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ST3GAL4Q11206 333 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SEMA3BQ13214 749 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TEAD4Q15561 434 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ARL9Q6T311 187 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SHISA6Q6ZSJ9 500 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 OR51L1Q8NGJ5 315 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 FIBINQ8TAL6 211 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SLC38A4Q969I6 547 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ITFG2Q969R8 447 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 DPH7Q9BTV6 452 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 PLAC1Q9HBJ0 212 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 TMEM138Q9NPI0 162 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 ZDHHC7Q9NXF8 308 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 SPATA7Q9P0W8 599 aa4.59□□□□□ -1.67
UBR1-201ENST00000290650 OTOFQ9HC10 1997 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 ARHGEF33A8MVX0 844 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 BLOC1S5-TXNDC5H3BN57 136 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 J3QLW9 94 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CDRT1O95170 752 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ZNF19P17023 458 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 SDC1P18827 310 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 EN2P19622 333 aaPredicted RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 AP1S2P56377 157 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 SIM1P81133 766 aaPredicted RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 AKAP14Q86UN6 197 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CARM1Q86X55 608 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ZZZ3Q8IYH5 903 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 OXR1Q8N573 874 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 MINDY1Q8N5J2 469 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 PIGXQ8TBF5 258 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 RAD9AQ99638 391 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 KAT8Q9H7Z6 458 aaKnown RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 NLGN3Q9NZ94 848 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 DNMT3BQ9UBC3 853 aaKnown RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 ENOPH1Q9UHY7 261 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CA14Q9ULX7 337 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 A0A1B0GVC2 190 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 A6NIN4 97 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CLDN25C9JDP6 229 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ANHXE9PGG2 379 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 LSM1O15116 133 aaKnown RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 FGF19O95750 216 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 MT-ND2P03891 347 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ASGR2P07307 311 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CBSLP0DN79 551 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CDK4P11802 303 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ADRB3P13945 408 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 TCF3P15923 654 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 MAOBP27338 520 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CBSP35520 551 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 GUCA1AP43080 201 aaPredicted RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 TIMM50Q3ZCQ8 353 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 LEXMQ3ZCV2 418 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 SH2D5Q6ZV89 423 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 CYS1Q717R9 158 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 PARS2Q7L3T8 475 aaKnown RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 FUNDC1Q8IVP5 155 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 NRSN1Q8IZ57 195 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 NLGN4XQ8N0W4 816 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 HM13Q8TCT9 377 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 LMX1AQ8TE12 382 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 SNX33Q8WV41 574 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ZUFSPQ96AP4 578 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 TRNT1Q96Q11 434 aaKnown RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 NKX2-4Q9H2Z4 354 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 SDR39U1Q9NRG7 319 aaPredicted RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 CUEDC1Q9NWM3 386 aaPredicted RBP4.59□□□□□ -1.68
UBR1-201ENST00000290650 TAS2R16Q9NYV7 291 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 P2RX2Q9UBL9 471 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 RIMS3Q9UJD0 308 aa4.59□□□□□ -1.68
UBR1-201ENST00000290650 ALPK2Q86TB3 2170 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 LOC100509620A0A075B734 347 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FAM171A2A8MVW0 826 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 EIF1AYO14602 144 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RPLP0P05388 317 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 IL12RB1P42701 662 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PPP2R2BQ00005 443 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ILF2Q12905 390 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RAB33AQ14088 237 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ERV3-1Q14264 604 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF234Q14588 700 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF750Q32MQ0 723 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms