RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 SOX9P48436 509 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 EPHA5P54756 1037 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 CAMK1Q14012 370 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TRAM2Q15035 370 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 GPAT4Q86UL3 456 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ZZZ3Q8IYH5 903 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TSEN15Q8WW01 171 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 KCNE4Q8WWG9 221 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TSC22D3Q99576 134 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 RNF38Q9H0F5 515 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 POU2F3Q9UKI9 436 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 SNX3O60493 162 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 DPM1O60762 260 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 HOXC4P09017 264 aaPredicted RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PNMTP11086 282 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PBX2P40425 430 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ARCN1P48444 511 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 VLDLRP98155 873 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 AFMIDQ63HM1 303 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM135Q86UB9 458 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TRIM74Q86UV6 250 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 GATAD2BQ8WXI9 593 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PDLIM5Q96HC4 596 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ALG2Q9H553 416 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM63AO94886 807 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 CDKN3Q16667 212 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 FAM174BQ3ZCQ3 159 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 TMEM225Q6GV28 225 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 KRT77Q7Z794 578 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 FBXW8Q8N3Y1 598 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 OR7G1Q8NGA0 311 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PIH1D2Q8WWB5 315 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 A0A096LPI6 279 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PLRG1O43660 514 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 FCGR2AP12318 317 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 RAB38P57729 211 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ILKQ13418 452 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 RANBP10Q6VN20 620 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 HSDL2Q6YN16 418 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PAPD5Q8NDF8 572 aaKnown RBP12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 CLHC1Q8NHS4 586 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 RCN3Q96D15 328 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 MVB12AQ96EY5 273 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 PARPBPQ9NWS1 579 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 SALL4Q9UJQ4 1053 aa12.86□□□□□ -0.35
PRPF38A-201ENST00000257181 OR51F1A6NGY5 319 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 A6NIZ1 184 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 TARM1B6A8C7 271 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 CD1DP15813 335 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 RYKP34925 604 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 MMP12P39900 470 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 RAP1BP61224 184 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 RAP1AP62834 184 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 TLR1Q15399 786 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 GPR68Q15743 365 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 OR5K2Q8NHB8 316 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 LRRN4Q8WUT4 740 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 KLHL21Q9UJP4 597 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 DLGAP4Q9Y2H0 992 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 PRKAB1Q9Y478 270 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 TNS1Q9HBL0 1735 aaKnown RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 C2orf92A0A1B0GVN3 265 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 LOC285095A0A1B0GVY8 99 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 ATP6AP2A0A1C7CYW4 349 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 ADAM12O43184 909 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 CHRM5P08912 532 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 DDCP20711 480 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 GKP32189 559 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 CDK6Q00534 326 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 LIPEQ05469 1076 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 PMS2P3Q13401 168 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 OTUD3Q5T2D3 398 aaPredicted RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 SPESP1Q6UW49 350 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 GNPDA2Q8TDQ7 276 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 NT5DC2Q9H857 520 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 PNPOQ9NVS9 261 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 SMOXQ9NWM0 555 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 A0A0G2JPF8 293 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 HNRNPCL3B7ZW38 293 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 CSTAP01040 98 aa12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
PRPF38A-201ENST00000257181 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms