RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Trim45Q6PFY8 580 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cnksr3Q8BMA3 555 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 C5ar2Q8BW93 344 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Csnk1g3Q8C4X2 424 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gramd1cQ8CI52 457 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Serpina11Q8CIE0 424 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sidt2Q8CIF6 832 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Prkd3Q8K1Y2 889 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr806Q8VFI2 313 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Snx11Q91WL6 271 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gorasp1Q91X51 446 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Khdc3Q9CWU5 440 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CenpnQ9CZW2 337 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam45aQ9D8N2 357 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam13cQ9DBR2 601 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sacm1lQ9EP69 587 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rad18Q9QXK2 509 aaKnown RBP9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tyk2Q9R117 1184 aa9.36□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CroccQ8CJ40 2009 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ddi2A2ADY9 399 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Lrr1D3YY91 422 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm340F6RGI3 1242 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cdc6O89033 562 aaKnown RBP9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rc3h2P0C090 1187 aaKnown RBP9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cdh3P10287 822 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ncam1P13595 1115 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pou3f3P31361 497 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Prkd1Q62101 918 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 A730061H03RikQ8BGD2 154 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Galnt12Q8BGT9 576 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cstf2Q8BIQ5 580 aaKnown RBP9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hmbox1Q8BJA3 419 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rgs7bpQ8BQP9 257 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nlgn3Q8BYM5 825 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sh3rf2Q8BZT2 735 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Lacc1Q8BZT9 430 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fbxl22Q8C7B6 236 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ScaiQ8C8N2 606 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Swi5Q8K3D3 89 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm16286Q9CQX6 220 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ranbp3Q9CT10 491 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Moxd1Q9CXI3 613 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rcan2Q9JHG2 197 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Kcne5Q9QZ26 143 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 NfkbiaQ9Z1E3 314 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Auts2A0A087WPF7 1261 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nt5c1aA3KFX0 365 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 4930579F01RikE9Q3L6 325 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn2r8L7N472 848 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Il13ra1O09030 424 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cacng1O70578 223 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CryaaP24622 196 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Etv2P41163 335 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cpt1aP97742 773 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MedagQ14BA6 303 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pdss2Q33DR3 401 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dennd1bQ3U1T9 766 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 PmlQ60953 885 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tlx2Q61663 284 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sqstm1Q64337 442 aaKnown RBP9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ManealQ6P1J0 452 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Snx6Q6P8X1 406 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr594Q7TRR4 311 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc39a9Q8BFU1 308 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mon1bQ8BMQ8 553 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 AcppQ8CE08 381 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Kctd2Q8CEZ0 266 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Unc5aQ8K1S4 898 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem30aQ8VEK0 364 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1346Q8VGH6 313 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gbgt1Q8VI38 347 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 FcrlaQ920A9 352 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ankrd7Q9D504 279 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ssr3Q9DCF9 185 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mapk9Q9WTU6 423 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Orc6Q9WUJ8 262 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cep350E9Q309 3095 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn1r77E9PY60 306 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Stmn3O70166 180 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CaskO70589 926 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 AcrP23578 436 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Serpina7P61939 418 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Kcnj8P97794 424 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Spin1Q61142 262 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Bhlhb9Q6PB60 539 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Lrrc75bQ7TPD7 306 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr96Q8VFE3 313 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mrgprb4Q91ZC0 321 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Clp1Q99LI9 425 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Qrsl1Q9CZN8 525 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Exosc7Q9D0M0 291 aaKnown RBP9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hyal6Q9D4E9 494 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dusp6Q9DBB1 381 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Clec2iQ9WVF9 217 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 B4galt6Q9WVK5 382 aa9.35□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 P01644 108 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 P01645 108 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 P01646 108 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 P01647 108 aa9.34□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gpx5P21765 221 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms