RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ptcd2Q8R3K3 381 aaKnown RBP10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr575Q8VH16 318 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Mthfd1Q922D8 935 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ndufaf4Q9D1H6 173 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Nt5c1aA3KFX0 365 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm8127E9Q0P0 100 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm20695H3BLK7 282 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm8094K7N6U8 211 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Socs5O54928 536 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Grap2O89100 322 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cyp1a1P00184 524 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fv4P11370 679 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 CryaaP24622 196 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Kcnh6Q32ME0 950 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Dpp10Q6NXK7 797 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Q810N5 247 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Slitrk6Q8C110 840 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zfp709Q8VC29 727 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr815Q8VFU0 316 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pcdhgb2Q91XX7 928 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pcdhb16Q91Y03 802 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Q9CWU4 180 aaKnown RBP10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Exosc7Q9D0M0 291 aaKnown RBP10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 NtsQ9D3P9 169 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pus10Q9D3U0 527 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cyb5r1Q9DB73 305 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Prokr1Q9JKL1 393 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tas2r119Q9JKT2 335 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Elovl2Q9JLJ4 292 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tpk1Q9R0M5 243 aa10.48□□□□□ -0.73
Msh3-201ENSMUST00000022220 Megf6Q80V70 1572 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 TomtA1Y9I9 258 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm20441G3UYJ7 252 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ackr2O08707 378 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 PnmtP40935 295 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Snrpd2P62317 118 aaKnown RBP10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fgf13P70377 245 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 ChatQ03059 641 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Padi2Q08642 673 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cmpk2Q3U5Q7 447 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zdhhc20Q5Y5T1 380 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Sema4cQ64151 834 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tmem151aQ6GQT5 468 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pex11gQ6P6M5 241 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Arl15Q8BGR6 204 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fjx1Q8BQB4 450 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fmo2Q8K2I3 535 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Vmn1r24Q8R2D6 296 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Vmn1r33Q8R2E0 305 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr394Q8VGR5 310 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gbgt1Q8VI38 347 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 TraipQ8VIG6 470 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Camk1gQ91VB2 477 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rwdd2bQ99M03 290 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tnfsf13Q9D777 241 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Aif1lQ9EQX4 150 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Esp18A8R0V1 91 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cped1B2RX70 1026 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 4930426L09RikE9Q0N7 123 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Vmn1r55E9Q8I6 310 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm21833J3QPK1 500 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Dnajb5O89114 348 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 GzmeP08884 248 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zfp14P10755 501 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gpr3P35413 330 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Plin2P43883 425 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Sult2a1P52843 285 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Vipr1P97751 459 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Crisp1Q03401 244 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 C2cd4cC2CD4Q5HZI2 419 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Sec24dQ6NXL1 1032 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Serpina3aQ6P4P1 422 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Myl12aQ6ZWQ9 172 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Wipi2Q80W47 445 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zhx3Q8C0Q2 951 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ptgr2Q8VDQ1 351 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tmem168Q91VX9 697 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr459Q924H8 314 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ms4a10Q99N03 267 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pbx4Q99NE9 378 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Vps29Q9QZ88 182 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cacna1aP97445 2368 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm33543A0A1B0GSI5 81 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr1247A2AT78 314 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr543E9PWI5 336 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ap1arE9PYF7 298 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm17174M0QWQ9 212 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Aif1O70200 147 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gpr50O88495 591 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tuba1bP05213 451 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tm9sf2P58021 662 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tuba1aP68369 451 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zc3hav1Q3UPF5 946 aaKnown RBP10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fcho2Q3UQN2 809 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 BC030870Q3V2G4 71 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Hsd3b5Q61694 373 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zfp324Q78F42 583 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ugt2b35Q8BJL9 529 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 BpifcQ8C186 509 aa10.47□□□□□ -0.73
Msh3-201ENSMUST00000022220 Creb5Q8K1L0 357 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms