RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CCR2P41597 374 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 TAB1Q15750 504 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 RSBN1Q5VWQ0 802 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SLC46A3Q7Z3Q1 461 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 VOPP1Q96AW1 172 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 POFUT2Q9Y2G5 429 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 ANXA8P13928 327 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 TNNI3P19429 210 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 NNMTP40261 264 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SF3B4Q15427 424 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCARB2-221ENST00000640341 TBCEQ15813 527 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SPDYE7PQ495Y7 208 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SPIN4Q56A73 249 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 ZNF697Q5TEC3 545 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 MSANTD1Q6ZTZ1 278 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 GPR65Q8IYL9 337 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 TCEAL8Q8IYN2 117 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 METTL4Q8N3J2 472 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 KBTBD8Q8NFY9 601 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 COL21A1Q96P44 957 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 ABCG4Q9H172 646 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 PADI2Q9Y2J8 665 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 PCDHGA2Q9Y5H1 932 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 K7ESM1 405 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 CCNB2O95067 398 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 ALDH1A1P00352 501 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 ADRA2AP08913 450 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 HOXB6P17509 224 aaKnown RBP13.97□□□□□ -0.17
SCARB2-221ENST00000640341 CNTN1Q12860 1018 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 TRIM40Q6P9F5 258 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 CEACAM20Q6UY09 585 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 CRIPAKQ8N1N5 446 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SLC43A3Q8NBI5 491 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SNTG1Q9NSN8 517 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 ANKMY1Q9P2S6 941 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
SCARB2-221ENST00000640341 SCN5AQ14524 2016 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 H0YIV9 168 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 SLCO2B1O94956 709 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 LATS1O95835 1130 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 CYP2A6P11509 494 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 POLR2EP19388 210 aaKnown RBP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 VIPR1P32241 457 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 PIK3CBP42338 1070 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 TMEM215Q68D42 235 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 RBM45Q8IUH3 476 aaKnown RBP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 BTN2A2Q8WVV5 523 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 FCGR1BQ92637 280 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 GLYATL1Q969I3 302 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 GABARAPL3Q9BY60 117 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 GPBP1L1Q9HC44 474 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 CLEC2DQ9UHP7 191 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 BTNL2Q9UIR0 455 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 CORO2BQ9UQ03 480 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 WDR37Q9Y2I8 494 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 HCFC2Q9Y5Z7 792 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 PPIBP23284 216 aaKnown RBP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 SOX6P35712 828 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 TUBA1BP68363 451 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 MPEG1Q2M385 716 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 TRIM60Q495X7 471 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 TUBA1AQ71U36 451 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 DEPDC4Q8N2C3 294 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 CHTF18Q8WVB6 975 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 STARD8Q92502 1023 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 BCL7BQ9BQE9 202 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 SLC6A16Q9GZN6 736 aa13.96□□□□□ -0.17
SCARB2-221ENST00000640341 NMNAT1Q9HAN9 279 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-221ENST00000640341 TRBV4-1A0A0J9YWV2 114 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 COQ9O75208 318 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 IFNW1P05000 195 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 CHMP24386 653 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 COPZ1P61923 177 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 PRSS53Q2L4Q9 553 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 RAET1GQ6H3X3 334 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 SLCO4C1Q6ZQN7 724 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 METTL3Q86U44 580 aaKnown RBP13.96□□□□□ -0.18
SCARB2-221ENST00000640341 SLC39A11Q8N1S5 342 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 IQCF1Q8N6M8 205 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 ING5Q8WYH8 240 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 POP5Q969H6 163 aaKnown RBP13.96□□□□□ -0.18
SCARB2-221ENST00000640341 YME1L1Q96TA2 773 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 ASAH2Q9NR71 780 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 ASF1AQ9Y294 204 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 HCN4Q9Y3Q4 1203 aa13.96□□□□□ -0.18
SCARB2-221ENST00000640341 VCANP13611 3396 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PIPSLA2A3N6 862 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 SLC16A5O15375 505 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PSIP1O75475 530 aaKnown RBP13.95□□□□□ -0.18
SCARB2-221ENST00000640341 MFN2O95140 757 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 CTSLP07711 333 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 MVDP53602 400 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PRKAG1P54619 331 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 PTPN5P54829 565 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 FADDQ13158 208 aa13.95□□□□□ -0.18
SCARB2-221ENST00000640341 HIST2H2AA3Q6FI13 130 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms