RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 LCN1P31025 176 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GPR143P51810 404 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CDK3Q00526 305 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PRKCZQ05513 592 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PLCXD2Q0VAA5 305 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF267Q14586 743 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF852Q6ZMS4 543 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MOB2Q70IA6 237 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 THOC6Q86W42 341 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 UBQLNLQ8IYU4 475 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF808Q8N4W9 903 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 METTL27Q8N6F8 245 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR9A1PQ8NGU1 263 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR14L1PQ8NHC6 308 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SLC5A11Q8WWX8 675 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SPOCK2Q92563 424 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM109Q9BVC6 243 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 S100A14Q9HCY8 104 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DNAJB9Q9UBS3 223 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CDH22Q9UJ99 828 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 NAALAD2Q9Y3Q0 740 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TNS2Q63HR2 1409 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CLCA1A8K7I4 914 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CLIC1O00299 241 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ACOX3O15254 700 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF217O75362 1048 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF14P17017 642 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 HRH2P25021 359 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ERP29P30040 261 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MSX2P35548 267 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MC3RP41968 323 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MLLT1Q03111 559 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 KLF10Q13118 480 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TUBA3CQ13748 450 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 BCL2L15Q5TBC7 163 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SNX29P2Q8IUI4 249 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF440Q8IYI8 595 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DCBLD1Q8N8Z6 715 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR6N2Q8NGY6 317 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ADAMTS18Q8TE60 1221 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 THAP3Q8WTV1 239 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 THAP4Q8WY91 577 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CPT1BQ92523 772 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SYT3Q9BQG1 590 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FUZQ9BT04 418 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PBDC1Q9BVG4 233 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TFB2MQ9H5Q4 396 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DHX33Q9H6R0 707 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RANBP3Q9H6Z4 567 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CNOT11Q9UKZ1 510 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FAM170BA6NMN3 283 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF99A8MXY4 864 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-209ENST00000635750 SLC7A4O43246 635 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 SNX3O60493 162 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 KLF8O95600 359 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-209ENST00000635750 ENGP17813 658 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 LIMK2P53671 638 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 LILRA4P59901 499 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FMO1Q01740 532 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 NOMO1Q15155 1222 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FRG2Q64ET8 278 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FAM180BQ6P0A1 224 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 LRRN1Q6UXK5 716 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 CASTOR1Q8WTX7 329 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 SLC44A1Q8WWI5 657 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 PTERQ96BW5 349 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 PDLIM2Q96JY6 352 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FRG2BQ96QU4 278 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 KCNMB3Q9NPA1 279 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 MEPEQ9NQ76 525 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-209ENST00000635750 AGAP5A6NIR3 686 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 TISP43B9A030 160 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 SHBGP04278 402 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 ITGB5P18084 799 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 XRCC1P18887 633 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-209ENST00000635750 POLR2CP19387 275 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-209ENST00000635750 NMBRP28336 390 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 PRKCIP41743 596 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FRKP42685 505 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-209ENST00000635750 TGFBR3Q03167 851 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 RAB11BQ15907 218 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 DUOXA1Q1HG43 343 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 NLGN4XQ8N0W4 816 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 LILRB2Q8N423 598 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 OR5B17Q8NGF7 314 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 RAB7BQ96AH8 199 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 TLR10Q9BXR5 811 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 UNC93B1Q9H1C4 597 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 SLAMF7Q9NQ25 335 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FAM118AQ9NWS6 357 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 FZD10Q9ULW2 581 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 STXBP5LQ9Y2K9 1186 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 WDR45Q9Y484 360 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM14AQ9Y6G1 99 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 C9IYK1 514 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 PROM1O43490 865 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 NOBOXO60393 691 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 DFNA5O60443 496 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 SLC2A1P11166 492 aa5.36□□□□□ -1.55
SCN1A-209ENST00000635750 JUNDP17535 347 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms