RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 F2RL3Q96RI0 385 aa18.02■□□□□ 0.48
CTSA-217ENST00000607482 DEFB126Q9BYW3 111 aa18.02■□□□□ 0.48
CTSA-217ENST00000607482 CDCP1Q9H5V8 836 aa18.02■□□□□ 0.48
CTSA-217ENST00000607482 ACTR8Q9H981 624 aa18.02■□□□□ 0.48
CTSA-217ENST00000607482 CPSF2Q9P2I0 782 aaKnown RBP18.02■□□□□ 0.48
CTSA-217ENST00000607482 ZNF490Q9ULM2 529 aaPredicted RBP18.02■□□□□ 0.48
CTSA-217ENST00000607482 SHANK1Q9Y566 2161 aa18.02■□□□□ 0.48
CTSA-217ENST00000607482 CCDC189A1A4V9 331 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 POC1B-GALNT4F8VUJ3 575 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 SH3BGRLO75368 114 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 KRT38O76015 456 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 MYO1DO94832 1006 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 KLHL2O95198 593 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 IFNA16P05015 189 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 SERPINB1P30740 379 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 SERPINB9P50453 376 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 RAP1GDS1P52306 607 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 PER3P56645 1201 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 RAB38P57729 211 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 STX4Q12846 297 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 AP5B1Q2VPB7 878 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 RPS19BP1Q86WX3 136 aaKnown RBP18.01■□□□□ 0.47
CTSA-217ENST00000607482 CEP112Q8N8E3 955 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 ATP6V1E2Q96A05 226 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 WDR34Q96EX3 536 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 ATOH8Q96SQ7 321 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 BARD1Q99728 777 aaKnown RBP18.01■□□□□ 0.47
CTSA-217ENST00000607482 CCDC77Q9BR77 488 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 CDC42EP4Q9H3Q1 356 aaKnown RBP18.01■□□□□ 0.47
CTSA-217ENST00000607482 KLHL1Q9NR64 748 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 COPG2Q9UBF2 871 aa18.01■□□□□ 0.47
CTSA-217ENST00000607482 DMGDHQ9UI17 866 aaKnown RBP18.01■□□□□ 0.47
CTSA-217ENST00000607482 TNPO3Q9Y5L0 923 aaKnown RBP18.01■□□□□ 0.47
CTSA-217ENST00000607482 TCRBV16S1A1N1A0A5B0 115 aa18■□□□□ 0.47
CTSA-217ENST00000607482 SAGE2PA6NJ88 616 aa18■□□□□ 0.47
CTSA-217ENST00000607482 GABRR3A8MPY1 467 aa18■□□□□ 0.47
CTSA-217ENST00000607482 FCHO1O14526 889 aa18■□□□□ 0.47
CTSA-217ENST00000607482 CERS1P27544 350 aa18■□□□□ 0.47
CTSA-217ENST00000607482 EEF1DP29692 281 aaKnown RBP18■□□□□ 0.47
CTSA-217ENST00000607482 PIK3CGP48736 1102 aa18■□□□□ 0.47
CTSA-217ENST00000607482 ALDH18A1P54886 795 aaKnown RBP18■□□□□ 0.47
CTSA-217ENST00000607482 HSD17B7P56937 341 aa18■□□□□ 0.47
CTSA-217ENST00000607482 TUBA3CQ13748 450 aa18■□□□□ 0.47
CTSA-217ENST00000607482 RUNX2Q13950 521 aa18■□□□□ 0.47
CTSA-217ENST00000607482 OR1C1Q15619 314 aa18■□□□□ 0.47
CTSA-217ENST00000607482 TMEM35AQ53FP2 167 aa18■□□□□ 0.47
CTSA-217ENST00000607482 LGSNQ5TDP6 509 aa18■□□□□ 0.47
CTSA-217ENST00000607482 H3F3CQ6NXT2 135 aa18■□□□□ 0.47
CTSA-217ENST00000607482 ABHD17CQ6PCB6 329 aa18■□□□□ 0.47
CTSA-217ENST00000607482 TUBA3EQ6PEY2 450 aa18■□□□□ 0.47
CTSA-217ENST00000607482 ZNF595Q8IYB9 648 aa18■□□□□ 0.47
CTSA-217ENST00000607482 FAM98AQ8NCA5 519 aaKnown RBP18■□□□□ 0.47
CTSA-217ENST00000607482 DNAJB8Q8NHS0 232 aa18■□□□□ 0.47
CTSA-217ENST00000607482 REPS1Q96D71 796 aa18■□□□□ 0.47
CTSA-217ENST00000607482 CMTM7Q96FZ5 175 aa18■□□□□ 0.47
CTSA-217ENST00000607482 PSMG3-AS1Q96PY0 264 aa18■□□□□ 0.47
CTSA-217ENST00000607482 TBCDQ9BTW9 1192 aa18■□□□□ 0.47
CTSA-217ENST00000607482 NECTIN3Q9NQS3 549 aa18■□□□□ 0.47
CTSA-217ENST00000607482 ADGRE2Q9UHX3 823 aa18■□□□□ 0.47
CTSA-217ENST00000607482 PTPN13Q12923 2485 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 A0A087WUV0 522 aaPredicted RBP17.99■□□□□ 0.47
CTSA-217ENST00000607482 SYNDIG1LA6NDD5 238 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 C4orf51C9J302 202 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 MLYCDO95822 493 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 TGFB1P01137 390 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 TNNI3P19429 210 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 CD96P40200 585 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 SSR2P43308 183 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 ST13P50502 369 aaKnown RBP17.99■□□□□ 0.47
CTSA-217ENST00000607482 CLCN2P51788 898 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 ADNP2Q6IQ32 1131 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 GFRALQ6UXV0 394 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 CLNKQ7Z7G1 428 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 RELL1Q8IUW5 271 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 IFT20Q8IY31 132 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 CENPLQ8N0S6 344 aaPredicted RBP17.99■□□□□ 0.47
CTSA-217ENST00000607482 LGI4Q8N135 537 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 KIF2BQ8N4N8 673 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 TMEM178AQ8NBL3 297 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 UHMK1Q8TAS1 419 aaKnown RBP17.99■□□□□ 0.47
CTSA-217ENST00000607482 UBTD2Q8WUN7 234 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 TMEM125Q96AQ2 219 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 LRFN1Q9P244 771 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 FBXW2Q9UKT8 454 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 ASB1Q9Y576 335 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 CLCA3PQ9Y6N3 262 aa17.99■□□□□ 0.47
CTSA-217ENST00000607482 SCN2AQ99250 2005 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 TRBV11-1A0A0K0K1C0 115 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 A1L4Q6 167 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 SAP18O00422 153 aaKnown RBP17.98■□□□□ 0.47
CTSA-217ENST00000607482 LRRTM2O43300 516 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 SMIM24O75264 130 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 RBP1P09455 135 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 CD22P20273 847 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 CNTFP26441 200 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 CASP2P42575 452 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 CYB561P49447 251 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 LIM2P55344 173 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 RBPJQ06330 500 aa17.98■□□□□ 0.47
CTSA-217ENST00000607482 SETDB1Q15047 1291 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms