RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 SUV39H1O43463 412 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 NOBOXO60393 691 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 JRKO75564 520 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 LAMP1P11279 417 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 CDK4P11802 303 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 HOXB2P14652 356 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 CXCR2P25025 360 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 ELK4P28324 431 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 SERPINB1P30740 379 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 NTSR1P30989 418 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 PCGF2P35227 344 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 HOXD12P35452 270 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 TBPL1P62380 186 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 ZNF648Q5T619 568 aaPredicted RBP12.18□□□□□ -0.46
SRSF5-215ENST00000556587 GPR107Q5VW38 600 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 LYSMD4Q5XG99 296 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 TRMT11Q7Z4G4 463 aaKnown RBP12.18□□□□□ -0.46
SRSF5-215ENST00000556587 CHDHQ8NE62 594 aaPredicted RBP12.18□□□□□ -0.46
SRSF5-215ENST00000556587 CDC26Q8NHZ8 85 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 SLC5A11Q8WWX8 675 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 NEIL2Q969S2 332 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 RAD51AP1Q96B01 352 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 SH3KBP1Q96B97 665 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 ZNF347Q96SE7 839 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 EPYCQ99645 322 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 GABRG3Q99928 467 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 OR2AG1Q9H205 316 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 SOX17Q9H6I2 414 aaPredicted RBP12.18□□□□□ -0.46
SRSF5-215ENST00000556587 PLGRKTQ9HBL7 147 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 CCNB1IP1Q9NPC3 277 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 KIF17Q9P2E2 1029 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 FZD4Q9ULV1 537 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 FAF1Q9UNN5 650 aaPredicted RBP12.18□□□□□ -0.46
SRSF5-215ENST00000556587 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
SRSF5-215ENST00000556587 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
SRSF5-215ENST00000556587 LOC400499M0QZD8 3231 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 SEMG1P04279 462 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ADRB3P13945 408 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 NPPBP16860 134 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 CCNA2P20248 432 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 IDSP22304 550 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 KELP23276 732 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PBLDP30039 288 aaPredicted RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 SHMT2P34897 504 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ITGA1P56199 1179 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ISL1P61371 349 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 RPS13P62277 151 aaKnown RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 FADDQ13158 208 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ARHGAP19Q14CB8 494 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 RGNQ15493 299 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 NEDD8Q15843 81 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 CYP2A13Q16696 494 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 C9orf64Q5T6V5 341 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 FAM46CQ5VWP2 391 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 KDM4DQ6B0I6 523 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 KIAA1211LQ6NV74 962 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 TRIM40Q6P9F5 258 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 NXPE4Q6UWF7 544 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 OR4A15Q8NGL6 344 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 CXorf40AQ8TE69 158 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 FBLIM1Q8WUP2 373 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PITHD1Q9GZP4 211 aaPredicted RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PCBD2Q9H0N5 130 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 MYNNQ9NPC7 610 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PADI2Q9Y2J8 665 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PCDHGB3Q9Y5G1 929 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PCDHGB1Q9Y5G3 927 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 MAGED1Q9Y5V3 778 aaPredicted RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 C1orf226A1L170 272 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 MYO1GB0I1T2 1018 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 C1QTNF9BB2RNN3 333 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 H3BMQ9 156 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ADAMDEC1O15204 470 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 KRT75O95678 551 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PROS1P07225 676 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 C1QTNF9P0C862 333 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 C6P13671 934 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ITGA2P17301 1181 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 NDUFV2P19404 249 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 RPL10P27635 214 aaKnown RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PDHA2P29803 388 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 GSTM5P46439 218 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 IST1P53990 364 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 RAB15P59190 212 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 RAE1P78406 368 aaKnown RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 HPCAP84074 193 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 CAMK2GQ13555 558 aaPredicted RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 HKDC1Q2TB90 917 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 LCTLQ6UWM7 567 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ERN2Q76MJ5 926 aaKnown RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 TSPYL5Q86VY4 417 aaPredicted RBP12.17□□□□□ -0.46
SRSF5-215ENST00000556587 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 OXR1Q8N573 874 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 ZFP90Q8TF47 636 aa12.17□□□□□ -0.46
SRSF5-215ENST00000556587 HSH2DQ96JZ2 352 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms