RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SLC39A8Q9C0K1 460 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SNX25Q9H3E2 840 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TXNRD2Q9NNW7 524 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MAN2C1Q9NTJ4 1040 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ERRFI1Q9UJM3 462 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 PCDHA7Q9UN72 937 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ERVK-11Q9UQG0 969 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NOX1Q9Y5S8 564 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 A0A0U1RQF3 1178 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 A0A1W2PPV4 95 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 GRID2IPA4D2P6 1211 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 CD8B2A6NJW9 211 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 TMEM200CA6NKL6 621 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 PPIAL4DF5H284 164 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 NR5A2O00482 541 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 YY2O15391 372 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 XRCC3O43542 346 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 SSX4O60224 188 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 UPK3AO75631 287 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 NFATC1O95644 943 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 CHRNGP07510 517 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 NUDT17P0C025 328 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 RFPL3SP0C7P2 107 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 PCMT1P22061 227 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ITPKBP27987 946 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 TNFRSF4P43489 277 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 RAB9AP51151 201 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 CCL11P51671 97 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ELLP55199 621 aaPredicted RBP3.94□□□□□ -1.78
USP44-208ENST00000552440 SEC61GP60059 68 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
USP44-208ENST00000552440 RAB11AP62491 216 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 E2F1Q01094 437 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ELAVL3Q14576 367 aaKnown RBP3.94□□□□□ -1.78
USP44-208ENST00000552440 TRIP10Q15642 601 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 RAB11BQ15907 218 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 HKDC1Q2TB90 917 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ALKBH6Q3KRA9 238 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 SPDYE7PQ495Y7 208 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 BEX5Q5H9J7 111 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 CTSL3PQ5NE16 218 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 RAET1LQ5VY80 246 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 PYHIN1Q6K0P9 492 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 MFSD12Q6NUT3 480 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 VPS36Q86VN1 386 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 KLBQ86Z14 1044 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 LRRC17Q8N6Y2 441 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ENGASEQ8NFI3 743 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 BEST2Q8NFU1 509 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 OR4N2Q8NGD1 307 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ERMNQ8TAM6 284 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 LRRC20Q8TCA0 184 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 GRHL3Q8TE85 626 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 TOP1MTQ969P6 601 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 FUBP1Q96AE4 644 aaKnown RBP3.94□□□□□ -1.78
USP44-208ENST00000552440 CIDECQ96AQ7 238 aaPredicted RBP3.94□□□□□ -1.78
USP44-208ENST00000552440 FKBP10Q96AY3 582 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 REPS1Q96D71 796 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 ADGRE3Q9BY15 652 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 MAGIXQ9H6Y5 334 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 CDH20Q9HBT6 801 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 PNO1Q9NRX1 252 aaKnown RBP3.94□□□□□ -1.78
USP44-208ENST00000552440 HIF1ANQ9NWT6 349 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 SMARCAL1Q9NZC9 954 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 HACD3Q9P035 362 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 OR14J1Q9UGF5 321 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 FBXO4Q9UKT5 387 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 B9D1Q9UPM9 204 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 TNNQ9UQP3 1299 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 SH2B3Q9UQQ2 575 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 NCKAP1Q9Y2A7 1128 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 CA5BQ9Y2D0 317 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 RHBDD3Q9Y3P4 386 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 INSL6Q9Y581 213 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 COX11Q9Y6N1 276 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 EVC2Q86UK5 1308 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 MROH2BQ7Z745 1585 aa3.94□□□□□ -1.78
USP44-208ENST00000552440 TYW5A2RUC4 315 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 METTL21EPA6NDL7 271 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SDHDO14521 159 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 PLPP2O43688 288 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CABYRO75952 493 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 NCR1O76036 304 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MYO1DO94832 1006 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 MOCS2O96007 188 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 PLEKP08567 350 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 OR2T7P0C7T2 308 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 HKR1P10072 659 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SAGP10523 405 aaPredicted RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 DBTP11182 482 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 MYL6BP14649 208 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 GNSP15586 552 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SRD5A1P18405 259 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 UBA1P22314 1058 aaKnown RBP3.93□□□□□ -1.78
USP44-208ENST00000552440 UQCRC2P22695 453 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 CTGFP29279 349 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 TRIM23P36406 574 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 POU3F4P49335 361 aa3.93□□□□□ -1.78
USP44-208ENST00000552440 SLC26A2P50443 739 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms