RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C18orf65Q6ZTR6 163 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 H2AFVQ71UI9 128 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KCTD9Q7L273 389 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GOLGA7Q7Z5G4 137 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZER1Q7Z7L7 766 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ADGRD2Q7Z7M1 963 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TLK2Q86UE8 772 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CNBD1Q8NA66 436 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GRHL3Q8TE85 626 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PHLDA1Q8WV24 401 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 UBLCP1Q8WVY7 318 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TMED6Q8WW62 240 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TCP11Q8WWU5 503 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 IRGQQ8WZA9 623 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PNPLA2Q96AD5 504 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SLC41A3Q96GZ6 507 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TGS1Q96RS0 853 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NDNQ99608 321 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 OMDQ99983 421 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FSD1Q9BTV5 496 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NTMT1Q9BV86 223 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PARLQ9H300 379 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 DPEP3Q9H4B8 488 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FAM124BQ9H5Z6 455 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM206Q9H813 350 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MINDY3Q9H8M7 445 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SDR39U1Q9NRG7 319 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NDE1Q9NXR1 346 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 THEGQ9P2T0 379 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 POLLQ9UGP5 575 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZNHIT2Q9UHR6 403 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FBXL2Q9UKC9 423 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SLC7A7Q9UM01 511 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 LOXL2Q9Y4K0 774 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ASB3Q9Y575 518 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SPIN1Q9Y657 262 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SELENOKQ9Y6D0 94 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 COL27A1Q8IZC6 1860 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KIF16BQ96L93 1317 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 A0A087X0K7 114 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 A6NDN8 102 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FRG2CA6NGY1 282 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MPTX1A8MV57 137 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 H0Y8G0 127 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CLDN5O00501 218 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 KCNJ13O60928 360 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PLGP00747 810 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ACAA1P09110 424 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 GSTA2P09210 222 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CD48P09326 243 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 DESP17661 470 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FUT1P19526 365 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 AKT2P31751 481 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SFNP31947 248 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 RPL3P39023 403 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CRYBB2P43320 205 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SULT1E1P49888 294 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ST8SIA6P61647 398 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SNRPEP62304 92 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CFAP221Q4G0U5 840 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC158Q5M9N0 1113 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 FNBP1LQ5T0N5 605 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF776Q68DI1 518 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 OR4A47Q6IF82 309 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MFSD12Q6NUT3 480 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CORO6Q6QEF8 472 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MEX3BQ6ZN04 569 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 STOX1Q6ZVD7 989 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PALB2Q86YC2 1186 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 DSELQ8IZU8 1212 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC185Q8N715 623 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MAPKAPK5-AS1Q8N8E1 139 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF383Q8NA42 475 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 SPATA3Q8NHX4 192 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 VANGL1Q8TAA9 524 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CD99L2Q8TCZ2 262 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF75CPQ92670 426 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 P3H4Q92791 437 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TANKQ92844 425 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CNOT6LQ96LI5 555 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 NKX3-1Q99801 234 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PSD2Q9BQI7 771 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PINK1Q9BXM7 581 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 LIN28AQ9H9Z2 209 aaKnown RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 PTGFRNQ9P2B2 879 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 B3GAT1Q9P2W7 334 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CHRNA9Q9UGM1 479 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TNNQ9UQP3 1299 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 GMPPBQ9Y5P6 360 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 MEGF6O75095 1541 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TNS2Q63HR2 1409 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 LAMC3Q9Y6N6 1575 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 CDK12Q9NYV4 1490 aaPredicted RBP0.93□□□□□ -2.26
HIF1A-204ENST00000539097 A0A0G2JLW4 131 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM129A0AVI4 362 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 ANKDD1BA6NHY2 528 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 WASHC1A8K0Z3 465 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 WASH3PC4AMC7 463 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 E9PI62 339 aa0.93□□□□□ -2.26
HIF1A-204ENST00000539097 KIF2AO00139 706 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms