RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 RDH14Q9HBH5 336 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 LZTFL1Q9NQ48 299 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 PRDM8Q9NQV8 689 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 POT1Q9NUX5 634 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 PKD2L2Q9NZM6 624 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 RSPH14Q9UHP6 348 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 APPL1Q9UKG1 709 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 SATB2Q9UPW6 733 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 WDR37Q9Y2I8 494 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 SEC16AO15027 2179 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 COL12A1Q99715 3063 aa4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 PRRC2CQ9Y520 2896 aaKnown RBP4.89□□□□□ -1.63
GCSHP4-201ENST00000538792 ZNF462Q96JM2 2506 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 A0A087WV48 116 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 IGHV1OR21-1A0A087WYE8 117 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 AGAP14A8MT82 685 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 CDRT15L2A8MXV6 281 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 MIF4GDA9UHW6 222 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ZNF814B7Z6K7 855 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 J3KTA2 159 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 GRID2O43424 1007 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 LIASO43766 372 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 NUDT21O43809 227 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SLC25A14O95258 325 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ACP5P13686 325 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ITIH1P19827 911 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 HLA-DPA1P20036 260 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 KCNJ1P48048 391 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ZNF140P52738 457 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 GEMP55040 296 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 UBE2IP63279 158 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ILF3Q12906 894 aaKnown RBP eCLIP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 C16orf72Q14CZ0 275 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 LONRF1Q17RB8 773 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 P3H1Q32P28 736 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 AMZ1Q400G9 498 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ZNF658BQ4V348 819 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ODF2Q5BJF6 829 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 IYDQ6PHW0 289 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 COLCA1Q6ZS62 124 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 BZW1Q7L1Q6 419 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SLC13A5Q86YT5 568 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 GALNT13Q8IUC8 556 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 CDKL3Q8IVW4 592 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 LAS2Q8IYD9 372 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 PIANPQ8IYJ0 282 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 MMP21Q8N119 569 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 NDUFAF2Q8N183 169 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SFRP1Q8N474 314 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 RNF10Q8N5U6 811 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 RASGEF1AQ8N9B8 481 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 OR4K2Q8NGD2 314 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 BCAS4Q8TDM0 211 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 NAT6Q93015 286 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 MSI2Q96DH6 328 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 VPS35Q96QK1 796 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 VAT1Q99536 393 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ZSCAN5AQ9BUG6 496 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 TBC1D10AQ9BXI6 508 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 GSDMCQ9BYG8 508 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 CARD9Q9H257 536 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 FAM96AQ9H5X1 160 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 POLR1BQ9H9Y6 1135 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ARNT2Q9HBZ2 717 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SEMA4BQ9NPR2 832 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SMARCAL1Q9NZC9 954 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 OGFRQ9NZT2 677 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 MSRB1Q9NZV6 116 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 VPS18Q9P253 973 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 ZNF624Q9P2J8 865 aaPredicted RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 PPP2R2CQ9Y2T4 447 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 SNRNP200O75643 2136 aaKnown RBP4.88□□□□□ -1.63
GCSHP4-201ENST00000538792 BAHCC1Q9P281 2608 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 TRBV5-3A0A0A0MS03 114 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 TRBV5-4A0A0C4DH59 114 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 A0A0G2JK05 382 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 IGHV5-10-1A0A0J9YXX1 117 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 TCRBV7S3A2A0A539 114 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 OR51F1A6NGY5 319 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 CD8B2A6NJW9 211 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 OR52A4PA6NMU1 304 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 USP27XA6NNY8 438 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 H3BNX3 289 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 TCEA3O75764 348 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 CDK14O94921 469 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 IPO7O95373 1038 aaKnown RBP4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 CCL4P13236 92 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 ZNF7P17097 686 aaPredicted RBP4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 CA4P22748 312 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 PSMA3P25788 255 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 NFKBIAP25963 317 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 ALDH4A1P30038 563 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 CCKBRP32239 447 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 SPAM1P38567 509 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 FASLGP48023 281 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 CLCNKAP51800 687 aa4.87□□□□□ -1.63
GCSHP4-201ENST00000538792 SLC12A2P55011 1212 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms