RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 PLPP1O14494 284 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 EFSO43281 561 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 CHST10O43529 356 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 B3GALT2O43825 422 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
FDFT1-219ENST00000531249 GRK2P25098 689 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 PTPN4P29074 926 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 SSR2P43308 183 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 XCR1P46094 333 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 HMGCS1Q01581 520 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 OCA2Q04671 838 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
FDFT1-219ENST00000531249 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
FDFT1-219ENST00000531249 BST1Q10588 318 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 RUNX2Q13950 521 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 ERV3-1Q14264 604 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 NKG7Q16617 165 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 AP5B1Q2VPB7 878 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 C10orf62Q5T681 223 aaPredicted RBP12.88□□□□□ -0.35
FDFT1-219ENST00000531249 OR4C11Q6IEV9 310 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 ZNF793Q6ZN11 406 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 SPATA21Q7Z572 469 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 TRIM42Q8IWZ5 723 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
FDFT1-219ENST00000531249 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 LRRC8CQ8TDW0 803 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 STARD8Q92502 1023 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 FKBP10Q96AY3 582 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 MIEF2Q96C03 454 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 QRFPRQ96P65 431 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 KCNC2Q96PR1 638 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 TBCDQ9BTW9 1192 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 EFHD1Q9BUP0 239 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 GPR87Q9BY21 358 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 C20orf27Q9GZN8 174 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 PRDM7Q9NQW5 492 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
FDFT1-219ENST00000531249 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 TCFL5Q9UL49 500 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 TRAF6Q9Y4K3 522 aa12.88□□□□□ -0.35
FDFT1-219ENST00000531249 A0A087WV48 116 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 NKX2-8O15522 239 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 JRKO75564 520 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 KLF7O75840 302 aaPredicted RBP12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ALBP02768 609 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ATP5A1P25705 553 aaKnown RBP12.87□□□□□ -0.35
FDFT1-219ENST00000531249 FOLR3P41439 243 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 MTTPP55157 894 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 BTKQ06187 659 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 CUL3Q13618 768 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ST3GAL2Q16842 350 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 MFSD4BQ5TF39 518 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 KANK2Q63ZY3 851 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 NIPAL1Q6NVV3 410 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 CCDC81Q6ZN84 652 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 CLYBLQ8N0X4 340 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 CA13Q8N1Q1 262 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ZNF781Q8N8C0 355 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 SPSB2Q99619 263 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 MRPL1Q9BYD6 325 aaKnown RBP12.87□□□□□ -0.35
FDFT1-219ENST00000531249 ACPTQ9BZG2 426 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 MANSC1Q9H8J5 431 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 BRF2Q9HAW0 419 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 CPNE5Q9HCH3 593 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 MKKSQ9NPJ1 570 aaPredicted RBP12.87□□□□□ -0.35
FDFT1-219ENST00000531249 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 KLHL14Q9P2G3 628 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 PPT2Q9UMR5 302 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 PCDHGA6Q9Y5G7 932 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 PTGDR2Q9Y5Y4 395 aa12.87□□□□□ -0.35
FDFT1-219ENST00000531249 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 H0YHG0 523 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 EEDO75530 441 aaKnown RBP12.86□□□□□ -0.35
FDFT1-219ENST00000531249 CREG1O75629 220 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 CDC123O75794 336 aaPredicted RBP12.86□□□□□ -0.35
FDFT1-219ENST00000531249 SEMA3DO95025 777 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 BMP10O95393 424 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 CHEK2O96017 543 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 GBAP04062 536 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 FGF4P08620 206 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 PRKAR1AP10644 381 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 HSD3B1P14060 373 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
FDFT1-219ENST00000531249 HSD3B2P26439 372 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 BSGP35613 385 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 KLC1Q07866 573 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 CSTF3Q12996 717 aaKnown RBP12.86□□□□□ -0.35
FDFT1-219ENST00000531249 IL10RAQ13651 578 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 MINDY4Q4G0A6 757 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 TRPM8Q7Z2W7 1104 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
FDFT1-219ENST00000531249 ZC3H7AQ8IWR0 971 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms