RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 FPR1P21462 350 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 FCARP24071 287 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 ITGB7P26010 798 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 GJA4P35212 333 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 TIE1P35590 1138 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 CHI3L1P36222 383 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 MAGEA2P43356 314 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 SNRPNP63162 240 aaKnown RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 TFF2Q03403 129 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 EPS8Q12929 822 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 MADCAM1Q13477 382 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 ELAVL3Q14576 367 aaKnown RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 MAD2L1BPQ15013 274 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 WSCD2Q2TBF2 565 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 LEXMQ3ZCV2 418 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 KIAA1614Q5VZ46 1190 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 CAPN13Q6MZZ7 669 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 FAM124AQ86V42 546 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 LRRC56Q8IYG6 542 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 ANKRD53Q8N9V6 530 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 SMARCD2Q92925 531 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 RAB8BQ92930 207 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 COX4I2Q96KJ9 171 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 KLHL42Q9P2K6 505 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 DKK3Q9UBP4 350 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 RPS6KA6Q9UK32 745 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 TMED5Q9Y3A6 229 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 COL4A3Q01955 1670 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 TRBV23OR9-2A0A075B6M9 112 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 A0A1W2PS29 197 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 C1orf226A1L170 272 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 HOXC11O43248 304 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 RGS10O43665 173 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 TIA1P31483 386 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHF3-205ENST00000494284 LIPAP38571 399 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 RXRGP48443 463 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 SEPHS1P49903 392 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 RGS21Q2M5E4 152 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 TRIM16LQ309B1 348 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 ERN2Q76MJ5 926 aaKnown RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 EIF3MQ7L2H7 374 aaKnown RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 OR9A1PQ8NGU1 263 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 APH1BQ8WW43 257 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 SUSD6Q92537 303 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 ANKRA2Q9H9E1 313 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
PHF3-205ENST00000494284 SLAMF7Q9NQ25 335 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 DMRT3Q9NQL9 472 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 DYRK4Q9NR20 520 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
PHF3-205ENST00000494284 PCDH17O14917 1159 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 UGT2B11O75310 529 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 SRPRAP08240 638 aaKnown RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 CHRM5P08912 532 aaPredicted RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 HNRNPA1P09651 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHF3-205ENST00000494284 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 PRPH2P23942 346 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 ACADLP28330 430 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 CLCNKAP51800 687 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 MVDP53602 400 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 PNLIPRP1P54315 467 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 INAQ16352 499 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 EXOC3L2Q2M3D2 409 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 PIP5KL1Q5T9C9 394 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 PARM1Q6UWI2 310 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 UBE2Q1Q7Z7E8 422 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 MEX3DQ86XN8 651 aaKnown RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 VPS37AQ8NEZ2 397 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 PSMA8Q8TAA3 256 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 PHOSPHO2Q8TCD6 241 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 C7orf34Q96L11 122 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 RDH12Q96NR8 316 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 APOL4Q9BPW4 351 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 WFDC6Q9BQY6 131 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 ACOT13Q9NPJ3 140 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 SACM1LQ9NTJ5 587 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 WDR70Q9NW82 654 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 NDUFAF4Q9P032 175 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 TMEM9Q9P0T7 183 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 TPRKBQ9Y3C4 175 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 PCDHGA6Q9Y5G7 932 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 EIF3FO00303 357 aaPredicted RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 SOX14O95416 240 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 DNTTP04053 509 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 TRPC1P48995 793 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 CLK1P49759 484 aaKnown RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 RPS3AP61247 264 aaKnown RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 CSTF3Q12996 717 aaKnown RBP11.85□□□□□ -0.51
PHF3-205ENST00000494284 SHHQ15465 462 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 ADCK2Q7Z695 626 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 OR8J2Q8NGG1 315 aa11.85□□□□□ -0.51
PHF3-205ENST00000494284 CXorf40AQ8TE69 158 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms