RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ZNF48Q96MX3 618 aaPredicted RBP4.05□□□□□ -1.76
GTF3A-208ENST00000493903 NUSAP1Q9BXS6 441 aaKnown RBP4.05□□□□□ -1.76
GTF3A-208ENST00000493903 LAT2Q9GZY6 243 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 RIOX1Q9H6W3 641 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 GORASP2Q9H8Y8 452 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 ACTR8Q9H981 624 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 VIPAS39Q9H9C1 493 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 FANCFQ9NPI8 374 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 SDR39U1Q9NRG7 319 aaPredicted RBP4.05□□□□□ -1.76
GTF3A-208ENST00000493903 NSG2Q9Y328 171 aa4.05□□□□□ -1.76
GTF3A-208ENST00000493903 FHOD3Q2V2M9 1422 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CGNL1Q0VF96 1302 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 LOC101059948A0A1B0GTJ6 334 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 TMEM89A2RUT3 159 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CCDC162PA2VCL2 907 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 H3BMM5 538 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 LANCL1O43813 399 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 KRT33AO76009 404 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 SYNGR4O95473 234 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 PROS1P07225 676 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 IGHV4-31P0DP07 118 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 RRASP10301 218 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CEACAM1P13688 526 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 B4GALT1P15291 398 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 GNSP15586 552 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 EFNA1P20827 205 aaPredicted RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CA6P23280 308 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 HTR2AP28223 471 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 TMOD1P28289 359 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 RBMS1P29558 406 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 HSPA2P54652 639 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 SSBP2P81877 361 aaPredicted RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 LGALS3BPQ08380 585 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 DLG1Q12959 904 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 SPHARQ15513 63 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 TAF13Q15543 124 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 TPD52L1Q16890 204 aaPredicted RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 GPR33Q49SQ1 333 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 BOLA3Q53S33 107 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ARHGEF16Q5VV41 709 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ZNF776Q68DI1 518 aaPredicted RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 YRDCQ86U90 279 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 EID3Q8N140 333 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 SLC43A2Q8N370 569 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ZCCHC7Q8N3Z6 543 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 MAPKAPK5-AS1Q8N8E1 139 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 STKLD1Q8NE28 680 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 OR2T12Q8NG77 320 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 TUBGCP3Q96CW5 907 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ZG16BQ96DA0 208 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 THOC3Q96J01 351 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 RPGRIP1Q96KN7 1286 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 S1PR3Q99500 378 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CCDC3Q9BQI4 270 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 UBAC1Q9BSL1 405 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CCM2Q9BSQ5 444 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ZSCAN5AQ9BUG6 496 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 MRPL13Q9BYD1 178 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 TMEM117Q9H0C3 514 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CPVLQ9H3G5 476 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 LRRC40Q9H9A6 602 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 UPF2Q9HAU5 1272 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ZBTB20Q9HC78 741 aaPredicted RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 HPS4Q9NQG7 708 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 DDX28Q9NUL7 540 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 GTSE1Q9NYZ3 720 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 PTTG2Q9NZH5 202 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 POU2F3Q9UKI9 436 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 MAN1B1Q9UKM7 699 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 KCNS2Q9ULS6 477 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 SMC3Q9UQE7 1217 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 CHMP2BQ9UQN3 213 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 NCKAP1Q9Y2A7 1128 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ASB3Q9Y575 518 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.04□□□□□ -1.76
GTF3A-208ENST00000493903 ARID2Q68CP9 1835 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 PRXQ9BXM0 1461 aa4.04□□□□□ -1.76
GTF3A-208ENST00000493903 NPC1L1Q9UHC9 1359 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 ABCC4O15439 1325 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 SYNRGQ9UMZ2 1314 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 SAMD9Q5K651 1589 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 C15orf38-AP3S2A0A0A6YYH1 394 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 TRBV5-5A0A0J9YX44 114 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 ATP6AP2A0A1C7CYW4 349 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 CLEC18AA5D8T8 446 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 ANKRD30BLA7E2S9 258 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 CCL24O00175 119 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 SLC22A2O15244 555 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 ADAM12O43184 909 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 NUDT21O43809 227 aaKnown RBP4.03□□□□□ -1.76
GTF3A-208ENST00000493903 NUDT3O95989 172 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 HIST1H2AGP0C0S8 130 aaPredicted RBP4.03□□□□□ -1.76
GTF3A-208ENST00000493903 ODC1P11926 461 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 GP9P14770 177 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 IL4RP24394 825 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 DPP4P27487 766 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 PTPN4P29074 926 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 FCGR2BP31994 310 aaPredicted RBP4.03□□□□□ -1.76
GTF3A-208ENST00000493903 NR2C2P49116 596 aa4.03□□□□□ -1.76
GTF3A-208ENST00000493903 CCR4P51679 360 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms