RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SDC3O75056 442 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 CCNDBP1O95273 360 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 RNF224P0DH78 156 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 GIMD1P0DJR0 217 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 IFNAR1P17181 557 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 CD53P19397 219 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 RPA1P27694 616 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 MATR3P43243 847 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS50-214ENST00000477935 PEX3P56589 373 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 CLDN20P56880 219 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 HNRNPKP61978 463 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS50-214ENST00000477935 EEF1A1P68104 462 aaKnown RBP4.31□□□□□ -1.72
VPS50-214ENST00000477935 TMEM132DQ14C87 1099 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 MYLK3Q32MK0 819 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 TMEM35AQ53FP2 167 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 EEF1A1P5Q5VTE0 462 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 TTI2Q6NXR4 508 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 FAM180BQ6P0A1 224 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 MARK2Q7KZI7 788 aaKnown RBP4.31□□□□□ -1.72
VPS50-214ENST00000477935 EFL1Q7Z2Z2 1120 aaKnown RBP4.31□□□□□ -1.72
VPS50-214ENST00000477935 CPLX4Q7Z7G2 160 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 NFE4Q86UQ8 179 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 VASH2Q86V25 355 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 CACUL1Q86Y37 369 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 ADGRF2Q8IZF7 708 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 PDCL2Q8N4E4 241 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 ERMNQ8TAM6 284 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 NAT6Q93015 286 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 ZNF560Q96MR9 790 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 NEURL2Q9BR09 285 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 NACA2Q9H009 215 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 FKRPQ9H9S5 495 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 COMMD8Q9NX08 183 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 DPP3Q9NY33 737 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 TAAR2Q9P1P5 351 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 COPG2Q9UBF2 871 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 CLIC4Q9Y696 253 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 CSNK1G3Q9Y6M4 447 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 PRRC2CQ9Y520 2896 aaKnown RBP4.31□□□□□ -1.72
VPS50-214ENST00000477935 TRIP11Q15643 1979 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 MYOFQ9NZM1 2061 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 A0A087WWV3 80 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 FAM90A26D6RGX4 464 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PRAMEF26H0Y7S4 382 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 MKRN2OSH3BPM6 223 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 CCER2I3L3R5 266 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 HS3ST1O14792 307 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 OGTO15294 1046 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 NDUFS3O75489 264 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 DEXIO95424 95 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PENKP01210 267 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 ATP5BP06576 529 aaKnown RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 CENPBP07199 599 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 FAM106CPP0CH98 169 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 CAPN3P20807 821 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 UGT1A1P22309 533 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 ITGA3P26006 1051 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 CHMLP26374 656 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PTGER4P35408 488 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PRCPP42785 496 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 ZBED6P86452 979 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 MC1RQ01726 317 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 NIPAL4Q0D2K0 466 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 SRSF6Q13247 344 aaKnown RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 ADIPOQQ15848 244 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 C20orf194Q5TEA3 1177 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 OR7E24Q6IFN5 339 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PAPD4Q6PIY7 484 aaKnown RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 RAD9BQ6WBX8 426 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 KCTD8Q6ZWB6 473 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 MAATS1Q7Z4T9 603 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 TBC1D1Q86TI0 1168 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 MAP7D3Q8IWC1 876 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 ARHGAP12Q8IWW6 846 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 NUP93Q8N1F7 819 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 METTL27Q8N6F8 245 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 SLC24A4Q8NFF2 622 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 OR1J2Q8NGS2 313 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 LRRC8CQ8TDW0 803 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 SLC44A1Q8WWI5 657 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 SGCDQ92629 289 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PIWIL1Q96J94 861 aaKnown RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 LURAP1Q96LR2 239 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 OMDQ99983 421 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 LRRC1Q9BTT6 524 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 TIPINQ9BVW5 301 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 RSPH9Q9H1X1 276 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 NEUROG2Q9H2A3 272 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PIGMQ9H3S5 423 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 PRSS16Q9NQE7 514 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 GDAP2Q9NXN4 497 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 CWC15Q9P013 229 aaKnown RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 ZNF69Q9UC07 566 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 AASSQ9UDR5 926 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 CHORDC1Q9UHD1 332 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 ERRFI1Q9UJM3 462 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 CDH9Q9ULB4 789 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 NAP1L2Q9ULW6 460 aaPredicted RBP4.3□□□□□ -1.72
VPS50-214ENST00000477935 U3KQA8 63 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms