RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	AP1M2	Q9Y6Q5	423 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	CAPN7	Q9Y6W3	813 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	MDC1	Q14676	2089 aa	Known RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	TRBC2	A0A5B9	178 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	DYTN	A2CJ06	578 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ANKDD1B	A6NHY2	528 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ISM1	B1AKI9	464 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	MKRN2OS	H3BPM6	223 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	HCRTR1	O43613	425 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	PRAMEF4	O60810	478 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	SNRNP200	O75643	2136 aa	Known RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	OR2B3	O76000	313 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	WISP1	O95388	367 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	NCF2	P19878	526 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	PTX3	P26022	381 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	AHR	P35869	848 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	REEP5	Q00765	189 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	IL10RA	Q13651	578 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	SLBP	Q14493	270 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ABRAXAS2	Q15018	415 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	NR6A1	Q15406	480 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	SF1	Q15637	639 aa	Known RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	GALNTL6	Q49A17	601 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	LACTB2	Q53H82	288 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	C6orf136	Q5SQH8	315 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	PRAMEF9	Q5VWM5	478 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	TCTN3	Q6NUS6	607 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	FAM198B	Q6UWH4	519 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663		Q6ZSR9	355 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	PTRH1	Q86Y79	214 aa	Known RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	GPR135	Q8IZ08	494 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	DNAJC22	Q8N4W6	341 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ENDOV	Q8N8Q3	282 aa	Known RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ADAMTS17	Q8TE56	1095 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	CENPK	Q9BS16	269 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	NMUR2	Q9GZQ4	415 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	SPRTN	Q9H040	489 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	C1orf109	Q9NX04	203 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	AHSP	Q9NZD4	102 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	VPS29	Q9UBQ0	182 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	ANAPC2	Q9UJX6	822 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	TCFL5	Q9UL49	500 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	EIF3L	Q9Y262	564 aa	Known RBP	11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	MAN2B2	Q9Y2E5	1009 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	CCL27	Q9Y4X3	112 aa		11.46	□□□□□ -0.57
CTNS-205	ENST00000467663	BOD1L1	Q8NFC6	3051 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	KRT87P	A6NCN2	255 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663		E9PBE3	544 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	PYCARD-AS1	I3L0S3	204 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	FFAR3	O14843	346 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	LSM1	O15116	133 aa	Known RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	GPR42	O15529	346 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	KLHL41	O60662	606 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CLEC3A	O75596	197 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	MYO1D	O94832	1006 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	SEMA3D	O95025	777 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	ZIC2	O95409	532 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	PDYN	P01213	254 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	JUN	P05412	331 aa	Known RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	PRPS2	P11908	318 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CDH1	P12830	882 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CD22	P20273	847 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	AGXT	P21549	392 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CALB2	P22676	271 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	GSTM5	P46439	218 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	BNIP1	Q12981	228 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CUL3	Q13618	768 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	HERC3	Q15034	1050 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	RPS6KA2	Q15349	733 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	AP5B1	Q2VPB7	878 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	DEFB110	Q30KQ9	67 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	SPIN4	Q56A73	249 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CATSPERE	Q5SY80	951 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	ZNF425	Q6IV72	752 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	RHBDD2	Q6NTF9	364 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	SRFBP1	Q8NEF9	429 aa	Known RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	TRPV3	Q8NET8	790 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	RP9	Q8TA86	221 aa	Known RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	N4BP2L2	Q92802	583 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	NSL1	Q96IY1	281 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	C3orf30	Q96M34	536 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CCDC106	Q9BWC9	280 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	SLC7A5P2	Q9GIP4	190 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	ZNF385D	Q9H6B1	395 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	LRTM1	Q9HBL6	345 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	ABCF3	Q9NUQ8	709 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CIDEB	Q9UHD4	219 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	PLCL2	Q9UPR0	1127 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	RUVBL1	Q9Y265	456 aa	Known RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	TP53TG5	Q9Y2B4	290 aa		11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	WBP11	Q9Y2W2	641 aa	Known RBP	11.45	□□□□□ -0.58
CTNS-205	ENST00000467663	CAPN14	A8MX76	684 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663		K7EM74	188 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	ZSCAN9	O15535	394 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	PEX11A	O75192	247 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	CTSB	P07858	339 aa		11.44	□□□□□ -0.58
CTNS-205	ENST00000467663	MAG	P20916	626 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms