RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 NLGN3Q9NZ94 848 aa3.31□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 SLC24A2Q9UI40 661 aa3.31□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 VPS28Q9UK41 221 aa3.31□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 HTTP42858 3142 aa3.31□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 MYO9BQ13459 2157 aa3.31□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 hCG_1807616A0A1W2PRN6 198 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 MTMR11A4FU01 709 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 GLOD5A6NK44 160 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 SLC1A7O00341 560 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 OGTO15294 1046 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 PRDM1O75626 825 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CD22P20273 847 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 EDNRAP25101 427 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 HOXD10P28358 340 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NDST2P52849 883 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CLDN15P56746 228 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NDPQ00604 133 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 RASGEF1BQ0VAM2 473 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 PRKG2Q13237 762 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 OPCMLQ14982 345 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 WTAPQ15007 396 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NPTX1Q15818 432 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ALDH1L2Q3SY69 923 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 PRR30Q53SZ7 412 aaPredicted RBP3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TMEM31Q5JXX7 168 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 FHL5Q5TD97 284 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 OR4C11Q6IEV9 310 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 RAET1EQ8TD07 263 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CHURC1Q8WUH1 139 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 RSRC1Q96IZ7 334 aaKnown RBP3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 BARD1Q99728 777 aaKnown RBP3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 UBAC1Q9BSL1 405 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 PRO3102Q9H379 93 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ANKZF1Q9H8Y5 726 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 PDE7BQ9NP56 450 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 OLAHQ9NV23 265 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 DDX25Q9UHL0 483 aaKnown RBP3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CPSF3Q9UKF6 684 aaKnown RBP3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 POMT2Q9UKY4 750 aa3.3□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NCAPD2Q15021 1401 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TPRP12270 2363 aaKnown RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 SNX3O60493 162 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ACSL3O95573 720 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CSN3P07498 182 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TNNT2P45379 298 aaPredicted RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 POLR2LP62875 67 aaKnown RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 C6orf163Q5TEZ5 329 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 RNLSQ5VYX0 342 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 OLFM4Q6UX06 510 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 C4orf50Q6ZRC1 276 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 Q6ZVH6 145 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 RCOR2Q8IZ40 523 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CD177Q8N6Q3 437 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TCEANCQ8N8B7 351 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 LRTM2Q8N967 370 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TSPAN14Q8NG11 270 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 SPPL2AQ8TCT8 520 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 KCNE4Q8WWG9 221 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 JAKMIP2Q96AA8 810 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 GUCD1Q96NT3 240 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TEX13AQ9BXU3 409 aaPredicted RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ZHX3Q9H4I2 956 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NOL11Q9H8H0 719 aaKnown RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 MRPL15Q9P015 296 aaKnown RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 HACD3Q9P035 362 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 LAMB1P07942 1786 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 COL4A5P29400 1685 aa3.29□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 UBR2Q8IWV8 1755 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 IGKV6D-21A0A0A0MT36 114 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TRIM49BA6NDI0 452 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 SAGP10523 405 aaPredicted RBP3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CCL5P13501 91 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 EPCAMP16422 314 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CYP11B2P19099 503 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 EIF2DP41214 584 aaKnown RBP3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 OR1D5P58170 312 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ERVK-16P61578 105 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 KIAA0141Q14154 515 aaPredicted RBP3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CTR9Q6PD62 1173 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CATSPER3Q86XQ3 398 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 DNAAF5Q86Y56 855 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 RASGEF1AQ8N9B8 481 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TEX19Q8NA77 164 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 U2AF1L4Q8WU68 220 aaKnown RBP3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 FEVQ99581 238 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CDX2Q99626 313 aaPredicted RBP3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 CPNE1Q99829 537 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 SDF4Q9BRK5 362 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 GSN-AS1Q9NRJ2 163 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 BLOC1S4Q9NUP1 217 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 TBC1D13Q9NVG8 400 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ZNF581Q9P0T4 197 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 IL17BQ9UHF5 180 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 NIP7Q9Y221 180 aaKnown RBP eCLIP3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 MUC3AQ02505 3323 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 ALPK3Q96L96 1907 aa3.28□□□□□ -1.88
PCDH9-AS4-201ENST00000456459 FAM208BQ5VWN6 2430 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms