RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 GPR85P60893 370 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 STX4Q12846 297 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 GXYLT1Q4G148 440 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 NDUFAF5Q5TEU4 345 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 IL20RBQ6UXL0 311 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 HSDL2Q6YN16 418 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 SLC22A16Q86VW1 577 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 KLHDC8AQ8IYD2 350 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 ACBD4Q8NC06 268 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 PSD4Q8NDX1 1056 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 OR5L2Q8NGL0 311 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 OR5M3Q8NGP4 307 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 OR10Q1Q8NGQ4 319 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 NCLNQ969V3 563 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 KIAA1191Q96A73 305 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 TREX2Q9BQ50 279 aaPredicted RBP12.38□□□□□ -0.43
HMGB3-204ENST00000448905 ZNF559Q9BR84 538 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 NT5DC2Q9H857 520 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 ADAP2Q9NPF8 381 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 MYOTQ9UBF9 498 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 CTNNAL1Q9UBT7 734 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 EDARQ9UNE0 448 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
HMGB3-204ENST00000448905 OR14I1A6ND48 311 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 FAM47E-STBD1D6RA91 191 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 BCKDKO14874 412 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
HMGB3-204ENST00000448905 CTNSO60931 367 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 OR2J2O76002 312 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 WDR47O94967 919 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 CNR1P21554 472 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 ELK3P41970 407 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 PLA2G16P53816 162 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 RAB38P57729 211 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 RUNX2Q13950 521 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 TESK1Q15569 626 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 ELAVL1Q15717 326 aaKnown RBP12.37□□□□□ -0.43
HMGB3-204ENST00000448905 HIST2H2ACQ16777 129 aaPredicted RBP12.37□□□□□ -0.43
HMGB3-204ENST00000448905 HIST2H2AA3Q6FI13 130 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 TRIM40Q6P9F5 258 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 SBSNQ6UWP8 590 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 GK5Q6ZS86 529 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 ADAMTSL2Q86TH1 951 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 MORN4Q8NDC4 146 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 OR52N2Q8NGI0 321 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 CFAP36Q96G28 342 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 SGCZQ96LD1 299 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 SERINC2Q96SA4 455 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 OSBPL9Q96SU4 736 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 ROGDIQ9GZN7 287 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 REXO4Q9GZR2 422 aaKnown RBP12.37□□□□□ -0.43
HMGB3-204ENST00000448905 SPNS1Q9H2V7 528 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 CNOT10Q9H9A5 744 aaKnown RBP12.37□□□□□ -0.43
HMGB3-204ENST00000448905 COPS7BQ9H9Q2 264 aaPredicted RBP12.37□□□□□ -0.43
HMGB3-204ENST00000448905 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 KCNN3Q9UGI6 736 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 OARD1Q9Y530 152 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 SPACA6W5XKT8 324 aa12.37□□□□□ -0.43
HMGB3-204ENST00000448905 FIGNL2A6NMB9 653 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 CDC7O00311 574 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 CES2O00748 559 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 CLGNO14967 610 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 CLEC3AO75596 197 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 TOXO94900 526 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 HOXD4P09016 255 aaPredicted RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 CCZ1BP86790 482 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 CCZ1P86791 482 aaPredicted RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 MGAT5Q09328 741 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 SERTAD2Q14140 314 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 MORF4L2Q15014 288 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 PPP1R3AQ16821 1122 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 MSS51Q4VC12 460 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 OPN5Q6U736 354 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 SLCO4C1Q6ZQN7 724 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 RTL4Q6ZR62 310 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 SYDE1Q6ZW31 735 aaPredicted RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 SCUBE1Q8IWY4 988 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 DMRTC2Q8IXT2 367 aaPredicted RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 TCAIMQ8N3R3 496 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 SRFBP1Q8NEF9 429 aaKnown RBP12.36□□□□□ -0.43
HMGB3-204ENST00000448905 OR2L5Q8NG80 312 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 OR2M7Q8NG81 312 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 MS4A6EQ96DS6 147 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 FAM173AQ9BQD7 235 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 ALOXE3Q9BYJ1 711 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 UCK2Q9BZX2 261 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 NSMCE4AQ9NXX6 385 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 GPRC5BQ9NZH0 403 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 HRH3Q9Y5N1 445 aa12.36□□□□□ -0.43
HMGB3-204ENST00000448905 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
HMGB3-204ENST00000448905 ADGRG4Q8IZF6 3080 aa12.35□□□□□ -0.43
HMGB3-204ENST00000448905 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
HMGB3-204ENST00000448905 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms