RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 SPEF2Q9C093 1822 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TRPM3Q9HCF6 1732 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 NCANO14594 1321 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TBC1D3KA0A087X1G2 549 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 LNP1A1A4G5 178 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 AGAP5A6NIR3 686 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 MMP20O60882 483 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FGBP02675 491 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ERCC1P07992 297 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 HLA-EP13747 358 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 LCP1P13796 627 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 LBPP18428 481 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ITGA6P23229 1130 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 MGAT1P26572 445 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 AKT1P31749 480 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 BCAT1P54687 386 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 CD81P60033 236 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RAP1AP62834 184 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FAM189BP81408 668 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ORC2Q13416 577 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 EIF4EBP2Q13542 120 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TDGQ13569 410 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 EXOSC2Q13868 293 aaKnown RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FASTKQ14296 549 aaKnown RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 LAPTM4AQ15012 233 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 CTF1Q16619 201 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 MEP1AQ16819 746 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TATDN3Q17R31 274 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TRIM60Q495X7 471 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 SBK1Q52WX2 424 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 NHSL2Q5HYW2 709 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 COLEC12Q5KU26 742 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 C18orf63Q68DL7 685 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 SULT6B1Q6IMI4 303 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 CDAN1Q8IWY9 1227 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FAM71AQ8IYT1 594 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 LILRA2Q8N149 483 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RASGEF1CQ8N431 466 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TMEM199Q8N511 208 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 BHLHE23Q8NDY6 225 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 BEND2Q8NDZ0 799 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 SHKBP1Q8TBC3 707 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FBXO25Q8TCJ0 367 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 HAS2Q92819 552 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 EDAQ92838 391 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 IGSF21Q96ID5 467 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 CPNE1Q99829 537 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 P2RY13Q9BPV8 354 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 PCBD2Q9H0N5 130 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 COPRSQ9NQ92 184 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ZDHHC3Q9NYG2 299 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 GCNT4Q9P109 453 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TSPAN16Q9UKR8 245 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FAM205AQ6ZU69 1335 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 hCG_1809904A0A1W2PP81 198 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 A0A1W2PPE2 198 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 A0A1W2PQJ5 194 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 A0A1W2PR64 198 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 A4D1N5 150 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 TRIM49D1C9J1S8 452 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 TSTD3H0UI37 97 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 MKRN2OSH3BPM6 223 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 GALR2O43603 387 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 FAM189A1O60320 539 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 MRPS14O60783 128 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 GLRA3O75311 464 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 RPLP2P05387 115 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 C1SP09871 688 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 ACPPP15309 386 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 HOXC9P31274 260 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 BAG6P46379 1132 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 SRP9P49458 86 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 CEBPDP49716 269 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 GMPSP49915 693 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 ARL4CP56559 192 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 RAB25P57735 213 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 E2F1Q01094 437 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 PRKCDQ05655 676 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 GPS1Q13098 491 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 SCGB2A2Q13296 93 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 ZNF239Q16600 458 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 BCL7AQ4VC05 210 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 TSTD2Q5T7W7 516 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 PIP5KL1Q5T9C9 394 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 FAHD2BQ6P2I3 314 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 ADGRD1Q6QNK2 874 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 SHC4Q6S5L8 630 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 BAIAP2L2Q6UXY1 529 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 SKA3Q8IX90 412 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 STPG2Q8N412 459 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 SFRP1Q8N474 314 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 NDNFQ8TB73 568 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 SLC35G2Q8TBE7 412 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 DYNC2LI1Q8TCX1 351 aa8.32□□□□□ -1.08
MCF2L2-203ENST00000447025 C2CD4CQ8TF44 421 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms