RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SPACA6W5XKT8 324 aa8.6□□□□□ -1.03
SMC1A-203ENST00000428014 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 TRAV17A0A0B4J275 112 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 DYTNA2CJ06 578 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 NCF1BA6NI72 391 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 NCF1CA8MVU1 366 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 SGK494L7N484 410 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 UBXN8O00124 270 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 CYR61O00622 381 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ERI3O43414 337 aaKnown RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PRMT3O60678 531 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 RDH16O75452 317 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 CLDN9O95484 217 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 MLYCDO95822 493 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 OTCP00480 354 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PDGFAP04085 211 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 NCF1P14598 390 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 TAC1P20366 129 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 HIST1H1TP22492 207 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ITGA3P26006 1051 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 IGLV3-21P80748 117 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 TLE1Q04724 770 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 BMPR2Q13873 1038 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 GTF2H2Q13888 395 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 COL9A2Q14055 689 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 NR6A1Q15406 480 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 NSDHLQ15738 373 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PFKFB4Q16877 469 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 CCDC153Q494R4 210 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 KHDRBS2Q5VWX1 349 aaKnown RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 GTF2H2CQ6P1K8 395 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 RNF165Q6ZSG1 346 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 SH2D5Q6ZV89 423 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PRSS41Q7RTY9 318 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ATCAYQ86WG3 371 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 CA13Q8N1Q1 262 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 SPATA6LQ8N4H0 392 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 MREGQ8N565 214 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 SNX31Q8N9S9 440 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ELP5Q8TE02 316 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 MZB1Q8WU39 189 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 MOCOSQ96EN8 888 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF354BQ96LW1 612 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 SERPINI1Q99574 410 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PELOQ9BRX2 385 aaKnown RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 TMEM109Q9BVC6 243 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 SLC29A3Q9BZD2 475 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 VPS11Q9H270 941 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 DDX31Q9H8H2 851 aaKnown RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 IPPKQ9H8X2 491 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ACTR8Q9H981 624 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF71Q9NQZ8 489 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 NMRK1Q9NWW6 199 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 KCMF1Q9P0J7 381 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ABI3Q9P2A4 366 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 XPR1Q9UBH6 696 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PHF11Q9UIL8 331 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 MID2Q9UJV3 735 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 PCTPQ9UKL6 214 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ANGPTL3Q9Y5C1 460 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 CPAMD8Q8IZJ3 1885 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 FLNBO75369 2602 aaKnown RBP8.59□□□□□ -1.03
SMC1A-203ENST00000428014 ESPL1Q14674 2120 aa8.59□□□□□ -1.03
SMC1A-203ENST00000428014 CCDC151A5D8V7 595 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 SAGE2PA6NJ88 616 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 NPIPB8E9PQR5 432 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 CTNSO60931 367 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 GLRA3O75311 464 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ATP5F1P24539 256 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 HNRNPH1P31943 449 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 TRHRP34981 398 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 CCT5P48643 541 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 TAS2R50P59544 299 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 HERVK_113P63132 956 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 IRF9Q00978 393 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 Q0VFX4 171 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ABRAXAS2Q15018 415 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ELAVL1Q15717 326 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 UAP1Q16222 522 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 AP5B1Q2VPB7 878 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 MINDY4Q4G0A6 757 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 TOR1AIP1Q5JTV8 583 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 FAM69BQ5VUD6 431 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 FRG2Q64ET8 278 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 MRM1Q6IN84 353 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 GOLGA7Q7Z5G4 137 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 CROCCP2Q86T23 111 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 GPALPP1Q8IXQ4 340 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 PLD6Q8N2A8 252 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 DTWD1Q8N5C7 304 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 SLC5A8Q8N695 610 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 TEX9Q8N6V9 391 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 HORMAD2Q8N7B1 307 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 Q8NA96 180 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 DNAJB8Q8NHS0 232 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 TANKQ92844 425 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 DAZLQ92904 295 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 CAVIN3Q969G5 261 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms