RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 YIPF4Q9BSR8 244 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TMEM45AQ9NWC5 275 aa8.79□□□□□ -1
HPS4-203ENST00000402105 HCN4Q9Y3Q4 1203 aa8.79□□□□□ -1
HPS4-203ENST00000402105 PCDHGA2Q9Y5H1 932 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TRBV4-1A0A0J9YWV2 114 aa8.79□□□□□ -1
HPS4-203ENST00000402105 FAM172BPA6NC97 362 aa8.79□□□□□ -1
HPS4-203ENST00000402105 H7C0S8 307 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SCAMP2O15127 329 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 ARHGEF9O43307 516 aa8.79□□□□□ -1
HPS4-203ENST00000402105 NCR1O76036 304 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CH25HO95992 272 aa8.79□□□□□ -1
HPS4-203ENST00000402105 IFNW1P05000 195 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CD72P21854 359 aa8.79□□□□□ -1
HPS4-203ENST00000402105 PAX3P23760 479 aa8.79□□□□□ -1
HPS4-203ENST00000402105 MYL9P24844 172 aa8.79□□□□□ -1
HPS4-203ENST00000402105 GSTM5P46439 218 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CSNK2BP67870 215 aa8.79□□□□□ -1
HPS4-203ENST00000402105 C1DQ13901 141 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 QPRTQ15274 297 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SSX1Q16384 188 aa8.79□□□□□ -1
HPS4-203ENST00000402105 SMU1Q2TAY7 513 aa8.79□□□□□ -1
HPS4-203ENST00000402105 CLEC12AQ5QGZ9 265 aa8.79□□□□□ -1
HPS4-203ENST00000402105 OR2G6Q5TZ20 316 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TRIQKQ629K1 86 aa8.79□□□□□ -1
HPS4-203ENST00000402105 ALG1LQ6GMV1 187 aa8.79□□□□□ -1
HPS4-203ENST00000402105 PLET1Q6UQ28 207 aa8.79□□□□□ -1
HPS4-203ENST00000402105 LRRC70Q7Z2Q7 622 aa8.79□□□□□ -1
HPS4-203ENST00000402105 DEFB128Q7Z7B8 93 aa8.79□□□□□ -1
HPS4-203ENST00000402105 KRT73Q86Y46 540 aa8.79□□□□□ -1
HPS4-203ENST00000402105 DNAJB8Q8NHS0 232 aa8.79□□□□□ -1
HPS4-203ENST00000402105 NACC2Q96BF6 587 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TRMT61AQ96FX7 289 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 CEP295NLQ96MC4 621 aa8.79□□□□□ -1
HPS4-203ENST00000402105 OR2A14Q96R47 310 aa8.79□□□□□ -1
HPS4-203ENST00000402105 EPYCQ99645 322 aa8.79□□□□□ -1
HPS4-203ENST00000402105 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.79□□□□□ -1
HPS4-203ENST00000402105 GABARAPL1Q9H0R8 117 aa8.79□□□□□ -1
HPS4-203ENST00000402105 TMEM39AQ9NV64 488 aa8.79□□□□□ -1
HPS4-203ENST00000402105 FAM120CQ9NX05 1096 aaKnown RBP8.79□□□□□ -1
HPS4-203ENST00000402105 CASKO14936 926 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ALPPL2P10696 532 aa8.78□□□□□ -1
HPS4-203ENST00000402105 SRCP12931 536 aa8.78□□□□□ -1
HPS4-203ENST00000402105 JUPP14923 745 aa8.78□□□□□ -1
HPS4-203ENST00000402105 CRISP1P54107 249 aa8.78□□□□□ -1
HPS4-203ENST00000402105 IL18Q14116 193 aa8.78□□□□□ -1
HPS4-203ENST00000402105 FBXO43Q4G163 708 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ATAT1Q5SQI0 421 aa8.78□□□□□ -1
HPS4-203ENST00000402105 Q6ZVU0 165 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ASB18Q6ZVZ8 466 aa8.78□□□□□ -1
HPS4-203ENST00000402105 USP45Q70EL2 814 aa8.78□□□□□ -1
HPS4-203ENST00000402105 WDR53Q7Z5U6 358 aaPredicted RBP8.78□□□□□ -1
HPS4-203ENST00000402105 SYNPOQ8N3V7 929 aa8.78□□□□□ -1
HPS4-203ENST00000402105 WDR48Q8TAF3 677 aa8.78□□□□□ -1
HPS4-203ENST00000402105 CLP1Q92989 425 aaKnown RBP8.78□□□□□ -1
HPS4-203ENST00000402105 CLSTN3Q9BQT9 956 aa8.78□□□□□ -1
HPS4-203ENST00000402105 BARHL1Q9BZE3 327 aa8.78□□□□□ -1
HPS4-203ENST00000402105 NLKQ9UBE8 527 aa8.78□□□□□ -1
HPS4-203ENST00000402105 B4GALT6Q9UBX8 382 aa8.78□□□□□ -1
HPS4-203ENST00000402105 IL20RAQ9UHF4 553 aa8.78□□□□□ -1
HPS4-203ENST00000402105 PLAGL1Q9UM63 463 aa8.78□□□□□ -1
HPS4-203ENST00000402105 PIKFYVEQ9Y2I7 2098 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ZSCAN5BA6NJL1 495 aa8.78□□□□□ -1
HPS4-203ENST00000402105 FAM25AB3EWG3 89 aa8.78□□□□□ -1
HPS4-203ENST00000402105 FAM25CB3EWG5 89 aa8.78□□□□□ -1
HPS4-203ENST00000402105 FAM25GB3EWG6 89 aa8.78□□□□□ -1
HPS4-203ENST00000402105 AKR7A2O43488 359 aa8.78□□□□□ -1
HPS4-203ENST00000402105 SEMA3DO95025 777 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ATP1B2P14415 290 aaPredicted RBP8.78□□□□□ -1
HPS4-203ENST00000402105 LHCGRP22888 699 aa8.78□□□□□ -1
HPS4-203ENST00000402105 APEX1P27695 318 aaKnown RBP8.78□□□□□ -1
HPS4-203ENST00000402105 SDC2P34741 201 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ETV3P41162 512 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ARPC4P59998 168 aa8.78□□□□□ -1
HPS4-203ENST00000402105 PFN3P60673 137 aa8.78□□□□□ -1
HPS4-203ENST00000402105 AP1S1P61966 158 aa8.78□□□□□ -1
HPS4-203ENST00000402105 MLLT1Q03111 559 aaPredicted RBP8.78□□□□□ -1
HPS4-203ENST00000402105 DSC1Q08554 894 aa8.78□□□□□ -1
HPS4-203ENST00000402105 PLAG1Q6DJT9 500 aa8.78□□□□□ -1
HPS4-203ENST00000402105 FRMPD2BQ6IN97 320 aa8.78□□□□□ -1
HPS4-203ENST00000402105 CEACAM20Q6UY09 585 aa8.78□□□□□ -1
HPS4-203ENST00000402105 MACC1Q6ZN28 852 aa8.78□□□□□ -1
HPS4-203ENST00000402105 TRMT11Q7Z4G4 463 aaKnown RBP8.78□□□□□ -1
HPS4-203ENST00000402105 TIGD4Q8IY51 512 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ATP6V1C2Q8NEY4 427 aa8.78□□□□□ -1
HPS4-203ENST00000402105 LINC01599Q8WXQ3 324 aa8.78□□□□□ -1
HPS4-203ENST00000402105 ZIC5Q96T25 663 aa8.78□□□□□ -1
HPS4-203ENST00000402105 SDHCQ99643 169 aaPredicted RBP8.78□□□□□ -1
HPS4-203ENST00000402105 SLX1AQ9BQ83 275 aa8.78□□□□□ -1
HPS4-203ENST00000402105 PRR14Q9BWN1 585 aa8.78□□□□□ -1
HPS4-203ENST00000402105 SLC12A9Q9BXP2 914 aa8.78□□□□□ -1
HPS4-203ENST00000402105 HDHD2Q9H0R4 259 aa8.78□□□□□ -1
HPS4-203ENST00000402105 C11orf54Q9H0W9 315 aaPredicted RBP8.78□□□□□ -1
HPS4-203ENST00000402105 POLR2J3Q9H1A7 115 aaKnown RBP8.78□□□□□ -1
HPS4-203ENST00000402105 UCKL1Q9NWZ5 548 aa8.78□□□□□ -1
HPS4-203ENST00000402105 SNX7Q9UNH6 387 aa8.78□□□□□ -1
HPS4-203ENST00000402105 HSPB11Q9Y547 144 aa8.78□□□□□ -1
HPS4-203ENST00000402105 MYO7AQ13402 2215 aa8.78□□□□□ -1
HPS4-203ENST00000402105 FAM240BA0A1B0GVZ2 78 aa8.78□□□□□ -1
HPS4-203ENST00000402105 TSPAN6O43657 245 aa8.78□□□□□ -1
HPS4-203ENST00000402105 CHRNB1P11230 501 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms