RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 MRPS7Q9Y2R9 242 aaKnown RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 DERAQ9Y315 318 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 INSL6Q9Y581 213 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 CACNG2Q9Y698 323 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 RANBP2P49792 3224 aaKnown RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 CIB4A0PJX0 185 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 PQLC2LA1A4F0 135 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 IRGMA1A4Y4 181 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 LCHNA4D1U4 455 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 HNRNPCL2B2RXH8 293 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 PPP6CO00743 305 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 KLK8O60259 260 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 SCN2BO60939 215 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 FGF18O76093 207 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 CCNB2O95067 398 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 S1PR4O95977 384 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 PRKAR1BP31321 381 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 HAAOP46952 286 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 IDH2P48735 452 aaKnown RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 HSPA7P48741 367 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 CLCNKAP51800 687 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 CDKN2DP55273 166 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 SMAD3P84022 425 aaKnown RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 NCF4Q15080 339 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 LRIF1Q5T3J3 769 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 ZNF57Q68EA5 555 aaPredicted RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 GPR153Q6NV75 609 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 IL27RAQ6UWB1 636 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 ADGRF3Q8IZF5 1079 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 OR6B3Q8NGW1 331 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 METTL6Q8TCB7 284 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 KLHL15Q96M94 604 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 NSUN5Q96P11 429 aaKnown RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 SLC2A13Q96QE2 648 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 OR52E6Q96RD3 313 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 GFM1Q96RP9 751 aaKnown RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 CPPED1Q9BRF8 314 aaPredicted RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 WACQ9BTA9 647 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 TMEM43Q9BTV4 400 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 NDUFB11Q9NX14 153 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 FNIP2Q9P278 1114 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 AASSQ9UDR5 926 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 SLC2A6Q9UGQ3 507 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 NDRG3Q9UGV2 375 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 PCTPQ9UKL6 214 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 CORO2BQ9UQ03 480 aa9.51□□□□□ -0.89
APTX-207ENST00000397172 POLR3HQ9Y535 204 aaPredicted RBP9.51□□□□□ -0.89
APTX-207ENST00000397172 LOC285095A0A1B0GVY8 99 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 CARNS1A5YM72 827 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 MFSD2BA6NFX1 497 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 QSOX1O00391 747 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 PCDH17O14917 1159 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 MATN3O15232 486 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 GATCO43716 136 aaKnown RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 CHP2O43745 196 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 AP2A2O94973 939 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 CDRT1O95170 752 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 SNAPINO95295 136 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 OTCP00480 354 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 CYP17A1P05093 508 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 MTHFD2P13995 350 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 MMP12P39900 470 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 HNRNPA0Q13151 305 aaKnown RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 KIAA0040Q15053 153 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 SPHARQ15513 63 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 OR4D1Q15615 310 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 RAB30Q15771 203 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 SNAPC1Q16533 368 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.5□□□□□ -0.89
APTX-207ENST00000397172 FAM174BQ3ZCQ3 159 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 SOWAHCQ53LP3 525 aaPredicted RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 RANBP10Q6VN20 620 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 ZNF704Q6ZNC4 412 aaPredicted RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 CCDC71Q8IV32 467 aaPredicted RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 CPA6Q8N4T0 437 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 B3GNT7Q8NFL0 401 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.5□□□□□ -0.898e-6■□□□□ 10.5
APTX-207ENST00000397172 TMEM163Q8TC26 289 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 SLC9A6Q92581 669 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 TRIM62Q9BVG3 475 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 BARHL1Q9BZE3 327 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 CD244Q9BZW8 370 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 ACTR6Q9GZN1 396 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 RSPH9Q9H1X1 276 aaPredicted RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 SLC28A3Q9HAS3 691 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 POLMQ9NP87 494 aaPredicted RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 VNN3Q9NY84 501 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 FBXW11Q9UKB1 542 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 NDRG2Q9UN36 371 aaKnown RBP9.5□□□□□ -0.89
APTX-207ENST00000397172 NUBP2Q9Y5Y2 271 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 CLCA3PQ9Y6N3 262 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 CDH10Q9Y6N8 788 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 COL4A6Q14031 1691 aa9.5□□□□□ -0.89
APTX-207ENST00000397172 PCM1Q15154 2024 aa9.49□□□□□ -0.89
APTX-207ENST00000397172 SYNJ2BP-COX16A0A087WUM0 186 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms