RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TMEM81Q6P7N7 255 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 LAS2Q8IYD9 372 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 RNF175Q8N4F7 328 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 LKAAEAR1Q8TD35 194 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 HHIPQ96QV1 700 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 NELL2Q99435 816 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 KATNB1Q9BVA0 655 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 TRIM62Q9BVG3 475 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 CDH10Q9Y6N8 788 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 PLXNB2O15031 1838 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 A0A0A6YYJ9 748 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 MOXD2PA6NHM9 499 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 TOR1AO14656 332 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 PSIP1O75475 530 aaKnown RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 EPB42P16452 691 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 LHCGRP22888 699 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 CLCN4P51793 760 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 CLCNKAP51800 687 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 SELENOWP63302 87 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 BTN1A1Q13410 526 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 RIN1Q13671 783 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 KCNC3Q14003 757 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 IL18Q14116 193 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 SPDYE7PQ495Y7 208 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 MPPE1Q53F39 396 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 KLHL22Q53GT1 634 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 GPR139Q6DWJ6 353 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 FRMPD2BQ6IN97 320 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 RNF165Q6ZSG1 346 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 NANOGP1Q8N7R0 232 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 DNAJC5GQ8N7S2 189 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 CDC26Q8NHZ8 85 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.36□□□□□ -0.116e-6■■■■■ 38.3
CTNS-202ENST00000381870 MYEOVQ96EZ4 313 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 MND1Q9BWT6 205 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 ARHGAP39Q9C0H5 1083 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 ING4Q9UNL4 249 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 OARD1Q9Y530 152 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 DOCK4Q8N1I0 1966 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 PAPPA2Q9BXP8 1791 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 FAM227AF5H4B4 570 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 LPOP22079 712 aaPredicted RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 CFL1P23528 166 aaKnown RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 PCSK1P29120 753 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 MTAPQ13126 283 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 RPA4Q13156 261 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 EXOSC2Q13868 293 aaKnown RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 GANABQ14697 944 aaKnown RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 TIGD5Q53EQ6 642 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 LIPIQ6XZB0 460 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 GPALPP1Q8IXQ4 340 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 GHDCQ8N2G8 530 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 AQP11Q8NBQ7 271 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 OR52P1PQ8NH57 321 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 KLHL6Q8WZ60 621 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 RIT1Q92963 219 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 WACQ9BTA9 647 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 TMEM43Q9BTV4 400 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 FAM126AQ9BYI3 521 aaPredicted RBP14.36□□□□□ -0.11
CTNS-202ENST00000381870 CIPCQ9C0C6 399 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 P2RY12Q9H244 342 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 CHST8Q9H2A9 424 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 PPA2Q9H2U2 334 aa14.36□□□□□ -0.11
CTNS-202ENST00000381870 CASTOR2A6NHX0 329 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PCDH7O60245 1069 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PRAMEF11O60813 436 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 CLDN9O95484 217 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 GASTP01350 101 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 IGFBP1P08833 259 aaPredicted RBP14.35□□□□□ -0.11
CTNS-202ENST00000381870 CTPS1P17812 591 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 SSTR2P30874 369 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 OR1E1P30953 314 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 CCT3P49368 545 aaKnown RBP14.35□□□□□ -0.11
CTNS-202ENST00000381870 MAP2K6P52564 334 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 CRISP1P54107 249 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 EPHA5P54756 1037 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 GRK1Q15835 563 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 LEXMQ3ZCV2 418 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 DLK2Q6UY11 383 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 GPAT4Q86UL3 456 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 FBXW5Q969U6 566 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 SAMD11Q96NU1 681 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 SERPINB11Q96P15 392 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 C1QTNF6Q9BXI9 259 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 ZC4H2Q9NQZ6 224 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 RHCGQ9UBD6 479 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 ZNF222Q9UK12 451 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PCDHGB7Q9Y5F8 929 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 WDR90Q96KV7 1748 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PPM1BO75688 479 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PRAMEF1O95521 474 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 ZNF865P0CJ78 1059 aaPredicted RBP14.35□□□□□ -0.11
CTNS-202ENST00000381870 EPORP19235 508 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PTGER3P43115 390 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 MLLT11Q13015 90 aaPredicted RBP14.35□□□□□ -0.11
CTNS-202ENST00000381870 IKZF1Q13422 519 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms