RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 P2RX6O15547 441 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 SRPX2O60687 465 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 DNAJA2O60884 412 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 SCELO95171 688 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 STAMBPO95630 424 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 ZNF888P0CJ79 500 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 MSX2P35548 267 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 BTN3A2P78410 334 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 TRAP1Q12931 704 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 FLOT2Q14254 428 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 NR0B2Q15466 257 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 LPAL2Q16609 132 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 RUNDC3AQ59EK9 446 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 NKAIN2Q5VXU1 208 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 DNAJC14Q6Y2X3 702 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 TICAM1Q8IUC6 712 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 CSNK1A1LQ8N752 337 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 AMER3Q8N944 861 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 JADE3Q92613 823 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 MIEF2Q96C03 454 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 ZNF764Q96H86 408 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 INPP5KQ9BT40 448 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 THUMPD3Q9BV44 507 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 ZMYND15Q9H091 742 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 ALG2Q9H553 416 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 FAM60AQ9NP50 221 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 PCDHGB4Q9UN71 923 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 USP34Q70CQ2 3546 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 NVLO15381 856 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 B4GAT1O43505 415 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 CPSF4O95639 269 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 SMIM10L1P0DMW3 83 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 ALDH9A1P49189 494 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 GFERP55789 205 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 VSX2P58304 361 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 LIPEQ05469 1076 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 BNIP2Q12982 314 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 CCDC6Q16204 474 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 ZNF385BQ569K4 471 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 MRM1Q6IN84 353 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 MCATQ8IVS2 390 aaKnown RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 Q8N9G6 341 aaPredicted RBP16.65■□□□□ 0.26
KRT28-201ENST00000306658 FAM181AQ8N9Y4 354 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 FAM156AQ8NDB6 213 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 SMIM10Q96HG1 83 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 ECSITQ9BQ95 431 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 CHRNA10Q9GZZ6 450 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 SLC25A37Q9NYZ2 338 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 GMEB2Q9UKD1 530 aa16.65■□□□□ 0.26
KRT28-201ENST00000306658 TRBV5-3A0A0A0MS03 114 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 SIGLEC6O43699 453 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 KIF1CO43896 1103 aaKnown RBP16.64■□□□□ 0.25
KRT28-201ENST00000306658 SH3BP5O60239 455 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 BCAS2O75934 225 aaPredicted RBP16.64■□□□□ 0.25
KRT28-201ENST00000306658 ZBTB11O95625 1053 aaPredicted RBP16.64■□□□□ 0.25
KRT28-201ENST00000306658 B3GALT4O96024 378 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 GSNP06396 782 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 CERS1P27544 350 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 PTPN6P29350 595 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 CDKN2CP42773 168 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 MTPNP58546 118 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 MS4A2Q01362 244 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 AMZ1Q400G9 498 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 NDUFAF5Q5TEU4 345 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 ZNF621Q6ZSS3 439 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 MSRB3Q8IXL7 192 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 CLECL1Q8IZS7 167 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 DNAJC22Q8N4W6 341 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 FAM47BQ8NA70 645 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 KCTD14Q9BQ13 255 aaPredicted RBP16.64■□□□□ 0.25
KRT28-201ENST00000306658 TRIM8Q9BZR9 551 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 DCLRE1BQ9H816 532 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 PDE7BQ9NP56 450 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 SOHLH2Q9NX45 425 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 TEX10Q9NXF1 929 aaPredicted RBP16.64■□□□□ 0.25
KRT28-201ENST00000306658 EHD3Q9NZN3 535 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 ASB4Q9Y574 426 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 PCDHGA5Q9Y5G8 931 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 ADAMTS9Q9P2N4 1935 aa16.64■□□□□ 0.25
KRT28-201ENST00000306658 NUP214P35658 2090 aaPredicted RBP16.64■□□□□ 0.25
KRT28-201ENST00000306658 ACOT8O14734 319 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 PCDHGA12O60330 932 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 EPN2O95208 641 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 ALOX12P18054 663 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 MLLT3P42568 568 aaPredicted RBP16.63■□□□□ 0.25
KRT28-201ENST00000306658 GSK3BP49841 420 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 SNCBQ16143 134 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 TMEM214Q6NUQ4 689 aaKnown RBP16.63■□□□□ 0.25
KRT28-201ENST00000306658 WDR74Q6RFH5 385 aaPredicted RBP16.63■□□□□ 0.25
KRT28-201ENST00000306658 MMP21Q8N119 569 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 ZCCHC10Q8TBK6 192 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 CCDC74AQ96AQ1 378 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 SLC6A13Q9NSD5 602 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 TAS2R7Q9NYW3 318 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 FBXW2Q9UKT8 454 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 RAB23Q9ULC3 237 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 VPS4AQ9UN37 437 aa16.63■□□□□ 0.25
KRT28-201ENST00000306658 NEUROG3Q9Y4Z2 214 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms