RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Asah2Q9JHE3 756 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Thbs4Q9Z1T2 963 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mgl2A9XX86 381 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Bloc1s1O55102 125 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Znf143O70230 638 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tbxa2rP30987 341 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Adamts8P57110 905 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Adora2aQ60613 410 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tfap2cQ61312 449 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 CishQ62225 257 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Surf4Q64310 269 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Znf821Q6PD05 413 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Sumf2Q8BPG6 308 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Synpo2lQ8BWB1 975 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ptges2Q8BWM0 384 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Prdm8Q8BZ97 687 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Usp44Q8C2S0 711 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 RadxQ8C779 850 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc36a1Q8K4D3 475 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Amhr2Q8K592 568 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 HnrnplQ8R081 586 aaKnown RBP8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mrgpra1Q91WW5 304 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Psmg3Q9CZH3 122 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Arv1Q9D0U9 266 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Chst1Q9EQC0 411 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Padi1Q9Z185 662 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Smarca2Q6DIC0 1577 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mast3Q3U214 1321 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vmn2r70K7N702 854 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gpr25P0C5I1 358 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 RorcP51450 516 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Acod1P54987 488 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 MybphP70402 483 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vipr1P97751 459 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 2410002F23RikQ3TE80 284 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mmp25Q3U435 615 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fam189bQ5HZJ5 669 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rab34Q64008 259 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Styk1Q6J9G1 429 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 March4Q80TE3 409 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Bcas1Q80YN3 633 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Crls1Q80ZM8 303 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tm9sf4Q8BH24 643 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Riox2Q8CD15 465 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ppwd1Q8CEC6 646 aaKnown RBP8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Mrgpra5Q91ZC7 304 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 March2Q99M02 246 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Apopt1Q9CQW7 192 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gprc5dQ9JIL6 344 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Clic4Q9QYB1 253 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc25a10Q9QZD8 287 aa8.65□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc23a4A0A0J9YUX7 615 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Lgr4A2ARI4 951 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Nipsnap1O55125 284 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 RrasP10833 218 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Itgb2P11835 771 aaKnown RBP8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 CryabP23927 175 aaKnown RBP8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Thbs1P35441 1170 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Eci1P42125 289 aaKnown RBP8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Lcp2Q60787 533 aaKnown RBP8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Dpp10Q6NXK7 797 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 NraddQ8CJ26 228 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 OlahQ8R197 265 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 NrmQ8VC65 262 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Rnf135Q9CWS1 417 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Coro7Q9D2V7 922 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Spsb1Q9D5L7 273 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 OcstampQ9D611 498 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Abcc4E9Q236 1325 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Tcte1A6H639 498 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Btbd16E9Q173 522 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr1360K9J6X0 313 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Tacr2P30549 384 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Rab5bP61021 215 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 PepdQ11136 493 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Q14AM7 275 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Tmem184cQ3TPR7 525 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Usp30Q3UN04 517 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Zfp957Q3UT76 567 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr1359Q7TQU5 313 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Lair1Q8BG84 263 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Q8BN57 294 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 SheQ8BSD5 492 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Steap2Q8BWB6 489 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Fam234aQ8C0Z1 555 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Znrd1-asQ8R0E5 213 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 MpiQ924M7 423 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Prl2b1Q9DAZ2 228 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Mfsd1Q9DC37 464 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 MvkQ9R008 395 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Suclg1Q9WUM5 346 aaKnown RBP8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Foxo4Q9WVH3 505 aa8.65□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Gm9008E9PVG0 424 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Vmn2r51L7N215 852 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Rbbp9O88851 186 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 LhcgrP30730 700 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Polr2gP62488 172 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Sfrp2P97299 295 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Olfr1507Q0VEP0 313 aa8.64□□□□□ -1.03
Clcn3-202ENSMUST00000056508 Defb23Q30KP0 166 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms