RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 UROSP10746 265 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PTX3P26022 381 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 CERS1P27544 350 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PTPN4P29074 926 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SLC1A6P48664 564 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 RAP1GDS1P52306 607 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 ABCE1P61221 599 aaKnown RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 RPS15P62841 145 aaKnown RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 BST1Q10588 318 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 STX3Q13277 289 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 CUL3Q13618 768 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 RUNX2Q13950 521 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 ERV3-1Q14264 604 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 TMEM35AQ53FP2 167 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SH2D4BQ5SQS7 431 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PRSS58Q8IYP2 241 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 CA13Q8N1Q1 262 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 OR51Q1Q8NH59 317 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 STT3BQ8TCJ2 826 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 STARD8Q92502 1023 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PEX11GQ96HA9 241 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 KCNC2Q96PR1 638 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SORT1Q99523 831 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SERPINI1Q99574 410 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SPSB2Q99619 263 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 GPR87Q9BY21 358 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 ZNF717Q9BY31 904 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 MRPL1Q9BYD6 325 aaKnown RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 RBCK1Q9BYM8 510 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 ACPTQ9BZG2 426 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SLC26A1Q9H2B4 701 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 EML4Q9HC35 981 aaKnown RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 ZNF282Q9UDV7 671 aaPredicted RBP12.49□□□□□ -0.41
GTF3A-209ENST00000640289 ZDHHC2Q9UIJ5 367 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 KCND3Q9UK17 655 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 TCFL5Q9UL49 500 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 SLC12A4Q9UP95 1085 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PCDHGA6Q9Y5G7 932 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 PTGDR2Q9Y5Y4 395 aa12.49□□□□□ -0.41
GTF3A-209ENST00000640289 IGLV3-12A0A075B6K2 115 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 DYNC1I1O14576 645 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ALBP02768 609 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ZGLP1P0C6A0 271 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 NR1D1P20393 614 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 GRK2P25098 689 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ATP5A1P25705 553 aaKnown RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 BSGP35613 385 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 SSR2P43308 183 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 XCR1P46094 333 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 MTTPP55157 894 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 HMGCS1Q01581 520 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 OCA2Q04671 838 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 TGM3Q08188 693 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 CSTF3Q12996 717 aaKnown RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 IL10RAQ13651 578 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ST3GAL2Q16842 350 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 AP5B1Q2VPB7 878 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 C10orf62Q5T681 223 aaPredicted RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ATP1A1-AS1Q5TC04 95 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 KANK2Q63ZY3 851 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 OR4C11Q6IEV9 310 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 CCDC81Q6ZN84 652 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ZC3H7AQ8IWR0 971 aaKnown RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 CLYBLQ8N0X4 340 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 ZNF781Q8N8C0 355 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 SRFBP1Q8NEF9 429 aaKnown RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 RGMAQ96B86 450 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 MIEF2Q96C03 454 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 SLC45A3Q96JT2 553 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 TBCDQ9BTW9 1192 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 EFHD1Q9BUP0 239 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 CPNE5Q9HCH3 593 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 MKKSQ9NPJ1 570 aaPredicted RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 PTRH2Q9Y3E5 179 aaKnown RBP12.48□□□□□ -0.41
GTF3A-209ENST00000640289 TRAF6Q9Y4K3 522 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 DNAJC15Q9Y5T4 150 aa12.48□□□□□ -0.41
GTF3A-209ENST00000640289 A0A088AWK7 358 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 OR2W5A6NFC9 320 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 NKX2-8O15522 239 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 B3GALT2O43825 422 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 EEDO75530 441 aaKnown RBP12.47□□□□□ -0.41
GTF3A-209ENST00000640289 CREG1O75629 220 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 CDC123O75794 336 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-209ENST00000640289 BMP10O95393 424 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 GBAP04062 536 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 UMODP07911 640 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 FGF4P08620 206 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 HSD3B1P14060 373 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 ZNF10P21506 573 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-209ENST00000640289 HIST1H1TP22492 207 aaPredicted RBP12.47□□□□□ -0.41
GTF3A-209ENST00000640289 HSD3B2P26439 372 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms