RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PHF21BQ96EK2 531 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MRPL48Q96GC5 212 aaKnown RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MSLNLQ96KJ4 702 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 C3orf30Q96M34 536 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 ZNF285Q96NJ3 590 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TMEM74Q96NL1 305 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TINF2Q9BSI4 451 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MCOLN1Q9GZU1 580 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MED28Q9H204 178 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 KCNH6Q9H252 994 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 GSTO2Q9H4Y5 243 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 GKN1Q9NS71 199 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MGAT4BQ9UQ53 548 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 PCDHGB7Q9Y5F8 929 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 C7orf66A4D0T2 115 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 LRRC14BA6NHZ5 514 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 E9PQ18 207 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 M0R233 179 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 SLC28A1O00337 649 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 LYRM1O43325 122 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 PAGE1O75459 146 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 SOX30O94993 753 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 RASGRP1O95267 797 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 IL6P05231 212 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 LTA4HP09960 611 aaKnown RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 PRF1P14222 555 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 HOXC13P31276 330 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TSPAN7P41732 249 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 NUBP1P53384 320 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 CDKN2DP55273 166 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 PURAQ00577 322 aaKnown RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 BEX3Q00994 111 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 GPR17Q13304 367 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 FGL2Q14314 439 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 GRB14Q14449 540 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 KLHL22Q53GT1 634 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 SOWAHCQ53LP3 525 aaPredicted RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 NHLRC3Q5JS37 347 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 CD276Q5ZPR3 534 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 KANK2Q63ZY3 851 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 BHLHB9Q6PI77 547 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TMEM179BQ7Z7N9 219 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 METTL23Q86XA0 190 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 SFT2D1Q8WV19 159 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 APH1BQ8WW43 257 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 DNASE1L2Q92874 299 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 SMARCD1Q96GM5 515 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TREX2Q9BQ50 279 aaPredicted RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MED18Q9BUE0 208 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 ASPNQ9BXN1 380 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TRIM8Q9BZR9 551 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 CARS2Q9HA77 564 aaKnown RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MPP6Q9NZW5 540 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MARCH4Q9P2E8 410 aaPredicted RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 NCKAP1Q9Y2A7 1128 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 AAR2Q9Y312 384 aaKnown RBP7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 TTC3P53804 2025 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 DENND4AQ7Z401 1863 aa7.22□□□□□ -1.25
TRIM49B-202ENST00000622138 MICAL3Q7RTP6 2002 aa7.21□□□□□ -1.25
TRIM49B-202ENST00000622138 A0A0G2JPF8 293 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 FABP12A6NFH5 140 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 OR51F1A6NGY5 319 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 HNRNPCL3B7ZW38 293 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 MATN3O15232 486 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 IRAK2O43187 625 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 GPX5O75715 221 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 ANXA9O76027 345 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 CCNB2O95067 398 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 SCELO95171 688 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 WISP3O95389 354 aaPredicted RBP7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PRAMEF1O95521 474 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 FBP1P09467 338 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 TSPAN19P0C672 248 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 HNRNPCL4P0DMR1 293 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 TGM4P49221 684 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PSEN2P49810 448 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 ARSDP51689 593 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 GEMP55040 296 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 WNT3AP56704 352 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 MAXP61244 160 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 POU4F1Q01851 419 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 EIF4EBP2Q13542 120 aaPredicted RBP7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 SIM2Q14190 667 aaPredicted RBP7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 GRB7Q14451 532 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PUM1Q14671 1186 aaKnown RBP eCLIP7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 FCN2Q15485 313 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 NKG7Q16617 165 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PFKFB4Q16877 469 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 LGALSLQ3ZCW2 172 aaPredicted RBP7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 TIGD5Q53EQ6 642 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PYDC2Q56P42 97 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PAGE3Q5JUK9 113 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 METAP1DQ6UB28 335 aaPredicted RBP7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 ENPP6Q6UWR7 440 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 TRIM69Q86WT6 500 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 PGBD3Q8N328 593 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 DNAJC22Q8N4W6 341 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 OR8J3Q8NGG0 315 aa7.21□□□□□ -1.26
TRIM49B-202ENST00000622138 WDR36Q8NI36 951 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms