RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SELEP16581 610 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 TMOD1P28289 359 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 MC5RP33032 325 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 HSPA1LP34931 641 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 PCGF2P35227 344 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 CAPGP40121 348 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SULT1E1P49888 294 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 YBEYP58557 167 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 DCDC1P59894 354 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 DHODHQ02127 395 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 CBX3Q13185 183 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SGCGQ13326 291 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SMU1Q2TAY7 513 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 CAVIN4Q5BKX8 364 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 CCDC183Q5T5S1 534 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 LCLAT1Q6UWP7 414 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 PET117Q6UWS5 81 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 OLFM4Q6UX06 510 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SLC24A5Q71RS6 500 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 HDDC3Q8N4P3 179 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 ANKRD13CQ8N6S4 541 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 LRTM2Q8N967 370 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 POMGNT2Q8NAT1 580 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 NOA1Q8NC60 698 aaKnown RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 GMCL1P1Q8NEA9 526 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 METTL21AQ8WXB1 218 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SEPT1Q8WYJ6 367 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 PROX1Q92786 737 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 PGAP3Q96FM1 320 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 CCDC114Q96M63 670 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 GBP5Q96PP8 586 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 RAB3IPQ96QF0 476 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 MMADHCQ9H3L0 296 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 MTHFD2LQ9H903 347 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 PIH1D3Q9NQM4 214 aaKnown RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 GPR83Q9NYM4 423 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 LNPEPQ9UIQ6 1025 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 LIPT1Q9Y234 373 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 RNF103-CHMP3A0A140T963 221 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 RNF103O00237 685 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 PGRMC2O15173 223 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 AP5Z1O43299 807 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 SNX3O60493 162 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 LRCH4O75427 683 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 SLCO2B1O94956 709 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 NXPH4O95158 308 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 TRIM16O95361 564 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 TOP1P11387 765 aaKnown RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 FERP16591 822 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 PAX7P23759 505 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 CCNA1P78396 465 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF177Q13360 481 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ALCAMQ13740 583 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 NFE2L1Q14494 772 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 OPCMLQ14982 345 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 NONOQ15233 471 aaKnown RBP eCLIP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 TYSND1Q2T9J0 566 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 RABL6Q3YEC7 729 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ERMARDQ5T6L9 678 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 KRT80Q6KB66 452 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ANGPTL8Q6UXH0 198 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF841Q6ZN19 808 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 CHST3Q7LGC8 479 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 PLPPR4Q7Z2D5 763 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ADCK1Q86TW2 530 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 C11orf53Q8IXP5 236 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 DRAXINQ8NBI3 349 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 FIBINQ8TAL6 211 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ROBO4Q8WZ75 1007 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 VPS33AQ96AX1 596 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF597Q96LX8 424 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 CDCA3Q99618 268 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 TUBB1Q9H4B7 451 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 HEXA-AS1Q9H8Q6 139 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 GSN-AS1Q9NRJ2 163 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ZNHIT6Q9NWK9 470 aaKnown RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 AKAP7Q9P0M2 348 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 CGNQ9P2M7 1197 aaKnown RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 DNAJB9Q9UBS3 223 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ANAPC5Q9UJX4 755 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ELF5Q9UKW6 265 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-229ENST00000621897 ITM2BQ9Y287 266 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 SELENOKQ9Y6D0 94 aa3.46□□□□□ -1.86
BRCA1-229ENST00000621897 SGK1O00141 431 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 CLDN4O14493 209 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RPS6KA5O75582 802 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 CELF2O95319 508 aaKnown RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 ARF4P18085 180 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 ADSSP30520 456 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 HNMTP50135 292 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 OR1D5P58170 312 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 GBE1Q04446 702 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 ACSM1Q08AH1 577 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RALGDSQ12967 914 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RPA4Q13156 261 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 PPP1R7Q15435 360 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms