RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 RELQ04864 619 aaPredicted RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 GABPAQ06546 454 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TRAF3Q13114 568 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 CALCRLQ16602 461 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TPD52L1Q16890 204 aaPredicted RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 IMMTQ16891 758 aaKnown RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 GPR33Q49SQ1 333 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 CFAP221Q4G0U5 840 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 FILIP1LQ4L180 1135 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TDRD12Q587J7 1177 aaKnown RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 SLC35D3Q5M8T2 416 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TPGS2Q68CL5 300 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 RHBDF2Q6PJF5 856 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TRMT1LQ7Z2T5 733 aaKnown RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 CPEB2Q7Z5Q1 589 aaKnown RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 RCOR2Q8IZ40 523 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 SLC43A2Q8N370 569 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 CLIP4Q8N3C7 705 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 RBMXL3Q8N7X1 1067 aaKnown RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 OR4C15Q8NGM1 316 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 BRSK1Q8TDC3 778 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 PHLDA1Q8WV24 401 aaPredicted RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 ZPBPQ9BS86 351 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TBCDQ9BTW9 1192 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 FUNDC2Q9BWH2 189 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 CAPS2Q9BXY5 557 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 GCOM2Q9BZD3 368 aaPredicted RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 MTIF3Q9H2K0 278 aaKnown RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 CHST11Q9NPF2 352 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 RDH8Q9NYR8 311 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 SMARCAL1Q9NZC9 954 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 AIPL1Q9NZN9 384 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 PILRAQ9UKJ1 303 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 ETV7Q9Y603 341 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 R4GN57 208 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 IGLV5-52A0A0A0MRZ9 124 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 A0A0G2JPF8 293 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ZNF732B4DXR9 585 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 C2CD4DB7Z1M9 353 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HNRNPCL3B7ZW38 293 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 RAMP2O60895 175 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 KCNJ13O60928 360 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 KIAA0754O94854 1291 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 YES1P07947 543 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HNRNPCL4P0DMR1 293 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HLA-DOBP13765 273 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HOXB2P14652 356 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ZNF23P17027 643 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 CA4P22748 312 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 TMOD1P28289 359 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ALDH4A1P30038 563 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 USP8P40818 1118 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 PTGFRP43088 359 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 MTIF2P46199 727 aaKnown RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 SLC6A8P48029 635 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 EEF1A1P68104 462 aaKnown RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 NUCB2P80303 420 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HEPACAMQ14CZ8 416 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 RBMS2Q15434 407 aaKnown RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 XKR3Q5GH77 459 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 EEF1A1P5Q5VTE0 462 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 LIPJQ5W064 366 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HIST2H2AA3Q6FI13 130 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ASPHD2Q6ICH7 369 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 SHC4Q6S5L8 630 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 DHRS11Q6UWP2 260 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 TAS2R42Q7RTR8 314 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 SATL1Q86VE3 508 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 FJX1Q86VR8 437 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 KRTAP1-3Q8IUG1 177 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ZDHHC17Q8IUH5 632 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ZC3H3Q8IXZ2 948 aaKnown RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 MAPKAPK5-AS1Q8N8E1 139 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 OR52N5Q8NH56 324 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 C16orf52Q8NHV5 167 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 METTL21AQ8WXB1 218 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 HSD17B8Q92506 261 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 PIK3R3Q92569 461 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 TMEM45BQ96B21 275 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ZNF48Q96MX3 618 aaPredicted RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 BTBD9Q96Q07 612 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 NUSAP1Q9BXS6 441 aaKnown RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 GON7Q9BXV9 100 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 LAT2Q9GZY6 243 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 COG4Q9H9E3 785 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 CALHM2Q9HA72 323 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 SDR39U1Q9NRG7 319 aaPredicted RBP4.6□□□□□ -1.67
RFC3-203ENST00000616236 OR6C2Q9NZP2 312 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 SLC7A7Q9UM01 511 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 CLEC4AQ9UMR7 237 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 FOXJ3Q9UPW0 622 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 COLEC10Q9Y6Z7 277 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 SPACA6W5XKT8 324 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 SF3B1O75533 1304 aaKnown RBP eCLIP4.6□□□□□ -1.674e-6■■■■■ 84.7
RFC3-203ENST00000616236 ZMYM6O95789 1325 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 PTCH1Q13635 1447 aa4.6□□□□□ -1.67
RFC3-203ENST00000616236 ATP6AP2A0A1C7CYW4 349 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 A8MUI8 341 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 ZNF587BE7ETH6 402 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms