RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 MTERF1Q99551 399 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CMKLR1Q99788 373 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ZPBPQ9BS86 351 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 CCDC28BQ9BUN5 200 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ACPTQ9BZG2 426 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 STRADBQ9C0K7 418 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 AICDAQ9GZX7 198 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 KLHL25Q9H0H3 589 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ASCL3Q9NQ33 180 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 FGF21Q9NSA1 209 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 ADAM29Q9UKF5 820 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 TMED5Q9Y3A6 229 aa10.59□□□□□ -0.71
CDK5RAP3-204ENST00000577664 OTOGQ6ZRI0 2925 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 A8MU76 341 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SDHDO14521 159 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SNX3O60493 162 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ETHE1O95571 254 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FAM107AO95990 144 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TGFB1P01137 390 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ITGB2P05107 769 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 JUNP05412 331 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SLC35G6P0C7Q6 338 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TROVE2P10155 538 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ARL1P40616 181 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MRPL19P49406 292 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ARL4DP49703 201 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SEPHS1P49903 392 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 IDH3AP50213 366 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 STXBP1P61764 594 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RPS13P62277 151 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RGS1Q08116 209 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 FAM214AQ32MH5 1076 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 WASHC2DQ5SRD0 308 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ADNP2Q6IQ32 1131 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CCDC81Q6ZN84 652 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 UBE3DQ7Z6J8 389 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MYLK4Q86YV6 388 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RCBTB1Q8NDN9 531 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR2L5Q8NG80 312 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR2T11Q8NH01 316 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CEP70Q8NHQ1 597 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MTFMTQ96DP5 389 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 MVB12AQ96EY5 273 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZNF717Q9BY31 904 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NLNQ9BYT8 704 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 REXO4Q9GZR2 422 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 DDX31Q9H8H2 851 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PRDM7Q9NQW5 492 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RIC8BQ9NVN3 520 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SOHLH2Q9NX45 425 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ASIC5Q9NY37 505 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 AHSPQ9NZD4 102 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KLHL3Q9UH77 587 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 WBP11Q9Y2W2 641 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PCDHGA8Q9Y5G5 932 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PCDHGA3Q9Y5H0 932 aa10.58□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPENQ96T58 3664 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NF1P21359 2839 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CELSR2Q9HCU4 2923 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 F8P00451 2351 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CCDC187A0A096LP49 1063 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 P2RX6O15547 441 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 NDUFS4O43181 175 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CSO75390 466 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 LINC00032P0C843 101 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KITP10721 976 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PCNAP12004 261 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 HNRNPH1P31943 449 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 BSGP35613 385 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GSTM5P46439 218 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PPM1FP49593 454 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ARSFP54793 590 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 AQP5P55064 265 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ITGA1P56199 1179 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 VSX2P58304 361 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RAB15P59190 212 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 EMX2Q04743 252 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 TUBB3Q13509 450 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 KCNAB1Q14722 419 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GRM7Q14831 915 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SPIN4Q56A73 249 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 C6orf136Q5SQH8 315 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 SNAP47Q5SQN1 464 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PHF19Q5T6S3 580 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ABHD17CQ6PCB6 329 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CPLX4Q7Z7G2 160 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZFAND4Q86XD8 727 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ZCCHC7Q8N3Z6 543 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CSNK1A1LQ8N752 337 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 ANKS4BQ8N8V4 417 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 OR1L3Q8NH93 324 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 AGR3Q8TD06 166 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 UTP15Q8TED0 518 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 CCT6BQ92526 530 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 GAL3ST3Q96A11 431 aa10.57□□□□□ -0.72
CDK5RAP3-204ENST00000577664 RGMAQ96B86 450 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms