RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ITGA10O75578 1167 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 H2AFB2P0C5Z0 115 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 PDHA2P29803 388 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 SSTR4P31391 388 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 EVI2BP34910 448 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 CASP3P42574 277 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 NCBP2P52298 156 aaKnown RBP eCLIP11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 MLLT1Q03111 559 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 SERPINA13PQ6UXR4 307 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 IQCF2Q8IXL9 164 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 FTMTQ8N4E7 242 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 GATAD2BQ8WXI9 593 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 TSGA13Q96PP4 275 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 NELL2Q99435 816 aa11.98□□□□□ -0.49
CSPG4P13-202ENST00000567704 CHRNB1P11230 501 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 VAMP1P23763 118 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 ACVR2AP27037 513 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 ACADLP28330 430 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 TAS2R50P59544 299 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GALNT1Q10472 559 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 SNTB2Q13425 540 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GRK1Q15835 563 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 C14orf80Q86SX3 495 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 TICAM1Q8IUC6 712 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 PARP16Q8N5Y8 322 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZNF676Q8N7Q3 588 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZNF563Q8TA94 476 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 IFT46Q9NQC8 304 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 IGSF5Q9NSI5 407 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 MGAT4CQ9UBM8 478 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 NOP16Q9Y3C1 178 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 UGT2A1Q9Y4X1 527 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 XKRYO14609 159 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 LYRM1O43325 122 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 PROM1O43490 865 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GABRR2P28476 465 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 AP1S2P56377 157 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 RAB2AP61019 212 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 SLC35F1Q5T1Q4 408 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 MEDAGQ5VYS4 303 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 TMEM17Q86X19 198 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 SLC5A8Q8N695 610 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GDPD1Q8N9F7 314 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZNF548Q8NEK5 533 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR8J1Q8NGP2 316 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 RERGQ96A58 199 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 WRAP53Q9BUR4 548 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 TRMT61BQ9BVS5 477 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 LGR4Q9BXB1 951 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 MROQ9BYG7 248 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 TTTY10Q9BZA0 68 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 ZDHHC3Q9NYG2 299 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 FBXO10Q9UK96 956 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 MYH1P12882 1939 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 MYH4Q9Y623 1939 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 HMX3A6NHT5 357 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 NEDD8-MDP1E9PL57 170 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 PI15O43692 258 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 RPP14O95059 124 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 PTNP21246 168 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 S100A2P29034 98 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GNALP38405 381 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 REEP3Q6NUK4 255 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR2T35Q8NGX2 323 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 OR10G6Q8NH81 332 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 EFCAB11Q9BUY7 163 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 YARS2Q9Y2Z4 477 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 PCDHGA4Q9Y5G9 962 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 CD8B2A6NJW9 211 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 CTDSP2O14595 271 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 CLDN7O95471 211 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 CD2P06729 351 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 CD8BP10966 210 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 LRRC37A5PQ49AS3 106 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 THOC6Q86W42 341 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 NPWQ8N729 165 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 L3HYPDHQ96EM0 354 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 C3orf30Q96M34 536 aa11.97□□□□□ -0.49
CSPG4P13-202ENST00000567704 MSL3P1P0C860 447 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 QSOX2Q6ZRP7 698 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 PHYKPLQ8IUZ5 450 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 GPC2Q8N158 579 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 LINC00471Q8N535 108 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 ACVR1CQ8NER5 493 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 STOML3Q8TAV4 291 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 CCM2Q9BSQ5 444 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 A0A1W2PPK0 400 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 H3BSH0 61 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 RASGRP1O95267 797 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 KCNA5P22460 613 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 ALAS2P22557 587 aa11.96□□□□□ -0.49
CSPG4P13-202ENST00000567704 RPS13P62277 151 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms