RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 ATOH8Q96SQ7 321 aa13.78□□□□□ -0.2
USB1-210ENST00000565151 LPAR4Q99677 370 aa13.78□□□□□ -0.2
USB1-210ENST00000565151 ZNF223Q9UK11 482 aaPredicted RBP13.78□□□□□ -0.2
USB1-210ENST00000565151 A8MUA0 341 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ZNHIT1O43257 154 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 PRMT3O60678 531 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 NEURL1O76050 574 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 RNH1P13489 461 aaKnown RBP13.77□□□□□ -0.21
USB1-210ENST00000565151 MTHFD2P13995 350 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 STMN1P16949 149 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 RAB10P61026 200 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ACTN3Q08043 901 aaPredicted RBP13.77□□□□□ -0.21
USB1-210ENST00000565151 E2F2Q14209 437 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ELOAQ14241 798 aaKnown RBP13.77□□□□□ -0.21
USB1-210ENST00000565151 EXT1Q16394 746 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ZNF766Q5HY98 468 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 C1QL3Q5VWW1 255 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 CCDC25Q86WR0 208 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 SCUBE1Q8IWY4 988 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 CTAGE3PQ8IX95 158 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ZNF354BQ96LW1 612 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 CSF3RQ99062 836 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 LRRC1Q9BTT6 524 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ZNF407Q9C0G0 2248 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 CDCP1Q9H5V8 836 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 NT5DC2Q9H857 520 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 DNAJC11Q9NVH1 559 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 ABI3Q9P2A4 366 aa13.77□□□□□ -0.21
USB1-210ENST00000565151 CACNA1CQ13936 2221 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 FBN2P35556 2912 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 SAGE2PA6NJ88 616 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 GABRR3A8MPY1 467 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 UBXN8O00124 270 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
USB1-210ENST00000565151 ZG16O60844 167 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 RASAL1O95294 804 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 GSTA2P09210 222 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 TPP2P29144 1249 aaPredicted RBP13.76□□□□□ -0.21
USB1-210ENST00000565151 DCTP40126 519 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 GPR143P51810 404 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 SLC12A2P55011 1212 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 IRF9Q00978 393 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 OR1C1Q15619 314 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 INAQ16352 499 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 MEP1AQ16819 746 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 RNFT1Q5M7Z0 435 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 GRTP1Q5TC63 336 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 SULT1C3Q6IMI6 304 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 ZNF793Q6ZN11 406 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 CENPLQ8N0S6 344 aaPredicted RBP13.76□□□□□ -0.21
USB1-210ENST00000565151 CYP4X1Q8N118 509 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 RNF175Q8N4F7 328 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 APCDD1LQ8NCL9 501 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 ANP32BQ92688 251 aaKnown RBP13.76□□□□□ -0.21
USB1-210ENST00000565151 EXT2Q93063 718 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 GAL3ST3Q96A11 431 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 NXNL1Q96CM4 212 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 F2RL3Q96RI0 385 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 PHACTR1Q9C0D0 580 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 ALG9Q9H6U8 611 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 PRDM9Q9NQV7 894 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 KLHL1Q9NR64 748 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 WWOXQ9NZC7 414 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 GPRC5BQ9NZH0 403 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 CSMD1Q96PZ7 3565 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 FREM3P0C091 2139 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 DCHS2Q6V1P9 2916 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 CSMD2Q7Z408 3487 aa13.76□□□□□ -0.21
USB1-210ENST00000565151 DNAJC13O75165 2243 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 LRBAP50851 2863 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 MYOCOSA0A1B0GUC4 107 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 LRRC14BA6NHZ5 514 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 CYR61O00622 381 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 PRKNO60260 465 aaPredicted RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 H2AFYO75367 372 aaKnown RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 CLEC3AO75596 197 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 STK16O75716 305 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 UNC5CO95185 931 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 UQCRHP07919 91 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 TFEBP19484 476 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 JAK1P23458 1154 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 PLA2G16P53816 162 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 MLF1P58340 268 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 ATP6V0D1P61421 351 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 AP2B1P63010 937 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 BMPR2Q13873 1038 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 CDKL4Q5MAI5 379 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 ABHD17CQ6PCB6 329 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 C16orf47Q6ZP98 133 aaPredicted RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 FJX1Q86VR8 437 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 CHERPQ8IWX8 916 aaKnown RBP13.75□□□□□ -0.21
USB1-210ENST00000565151 ARMC10Q8N2F6 343 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 TCAIMQ8N3R3 496 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 SNX31Q8N9S9 440 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 CDKL2Q92772 493 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 RELTQ969Z4 430 aa13.75□□□□□ -0.21
USB1-210ENST00000565151 TSPAN17Q96FV3 270 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms