RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-208ENST00000560509 DNAJB14Q8TBM8 379 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ZCCHC14Q8WYQ9 949 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 MR1Q95460 341 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 FBXL20Q96IG2 436 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 LURAP1Q96LR2 239 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 KLHL15Q96M94 604 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ZNF578Q96N58 590 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 C11orf70Q9BRQ4 267 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.55□□□□□ -1.84
BLM-208ENST00000560509 FICDQ9BVA6 458 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 PAPOLGQ9BWT3 736 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 TRIM31Q9BZY9 425 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 RNF32Q9H0A6 362 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MMP27Q9H306 513 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 CDC42EP4Q9H3Q1 356 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 CNOT10Q9H9A5 744 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 ERVK13-1Q9NX77 482 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 GFOD1Q9NXC2 390 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 GDF2Q9UK05 429 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 AMFRQ9UKV5 643 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 CSNK1G3Q9Y6M4 447 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 RNF215Q9Y6U7 377 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 COL4A6Q14031 1691 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 A0A087WZ62 844 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 CCDC187A0A096LP49 1063 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 A0A1W2PQ45 241 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 A0A1W2PQY0 241 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 SMCO3A2RU48 225 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MEI4A8MW99 385 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 K7ERI5 159 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MED7O43513 233 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 SPDEFO95238 335 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 SNAP29O95721 258 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 THBDP07204 575 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ACADSP16219 412 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 PTPN3P26045 913 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 TYK2P29597 1187 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 OTX2P32243 289 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 PREPP48147 710 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 HOXA1P49639 335 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 CYP2J2P51589 502 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MECP2P51608 486 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 VAMP7P51809 220 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MANFP55145 182 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 RGS8P57771 180 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 GPC5P78333 572 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MRPS11P82912 194 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 CDC42EP1Q00587 391 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 OGDHQ02218 1023 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 FOXM1Q08050 763 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 RASGEF1BQ0VAM2 473 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 LCP2Q13094 533 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 PRKAA1Q13131 559 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ART3Q13508 389 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 DYRK1AQ13627 763 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 PIGHQ14442 188 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 EMC2Q15006 297 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 SF1Q15637 639 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 ZNF829Q3KNS6 432 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 ZNF628Q5EBL2 1059 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MARC1Q5VT66 337 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 CCDC137Q6PK04 289 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 KIAA0408Q6ZU52 694 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 BHLHA15Q7RTS1 189 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 VTCN1Q7Z7D3 282 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 TAC4Q86UU9 113 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 CBWD2Q8IUF1 395 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ZBTB8OSQ8IWT0 167 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MRPL41Q8IXM3 137 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 TTC29Q8NA56 475 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 RBM15BQ8NDT2 890 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 ABHD5Q8WTS1 349 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 KCTD4Q8WVF5 259 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 AKAP1Q92667 903 aaKnown RBP eCLIP3.55□□□□□ -1.84
BLM-208ENST00000560509 CIDECQ96AQ7 238 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 SLC45A3Q96JT2 553 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ZNF641Q96N77 438 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 PRMT1Q99873 361 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 FDXACB1Q9BRP7 624 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 C17orf80Q9BSJ5 609 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ROPN1BQ9BZX4 212 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 FOXQ1Q9C009 403 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 RAB33BQ9H082 229 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 SMYD3Q9H7B4 428 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 RMND5AQ9H871 391 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 ACTR5Q9H9F9 607 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 ROPN1Q9HAT0 212 aaPredicted RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 IL26Q9NPH9 171 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 PRDM7Q9NQW5 492 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 SPG21Q9NZD8 308 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 CHRNA9Q9UGM1 479 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 STAP1Q9ULZ2 295 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 KCNK7Q9Y2U2 307 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 WBP11Q9Y2W2 641 aaKnown RBP3.55□□□□□ -1.84
BLM-208ENST00000560509 SNX24Q9Y343 169 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 MMACHCQ9Y4U1 282 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 HTTP42858 3142 aa3.55□□□□□ -1.84
BLM-208ENST00000560509 TBC1D3DA0A087WVF3 549 aa3.54□□□□□ -1.84
BLM-208ENST00000560509 TBC1D3IA0A087WXS9 549 aa3.54□□□□□ -1.84
BLM-208ENST00000560509 TBC1D3EA0A087X179 549 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms