RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ZNF770Q6IQ21 691 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 FAM53AQ6NSI3 398 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 TTC27Q6P3X3 843 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF790Q6PG37 636 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 TMEM207Q6UWW9 146 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 PIGWQ7Z7B1 504 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 PRUNE1Q86TP1 453 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 APLFQ8IW19 511 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 PRSS35Q8N3Z0 413 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 MSANTD4Q8NCY6 345 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 OR1L3Q8NH93 324 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 UBLCP1Q8WVY7 318 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 METTL21AQ8WXB1 218 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 TMEM190Q8WZ59 177 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 PPANQ9NQ55 473 aaKnown RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 ZNF71Q9NQZ8 489 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 IARS2Q9NSE4 1012 aaKnown RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 C2orf42Q9NWW7 574 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 TMEM161AQ9NX61 479 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 MTRRQ9UBK8 725 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 AGTPBP1Q9UPW5 1226 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 HBS1LQ9Y450 684 aaKnown RBP4.34□□□□□ -1.71
LIMA1-205ENST00000550592 STK36Q9NRP7 1315 aa4.34□□□□□ -1.71
LIMA1-205ENST00000550592 ERVV-2B6SEH9 535 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 KHDRBS3O75525 346 aaKnown RBP4.33□□□□□ -1.72
LIMA1-205ENST00000550592 RAD51DO75771 328 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 ATP1B1P05026 303 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 SP9P0CG40 484 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 C8orf89P0DMQ9 161 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 KRT3P12035 628 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 CYP2A7P20853 494 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 PIK3R1P27986 724 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 SSTR1P30872 391 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 EPS15P42566 896 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 RCN2Q14257 317 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
LIMA1-205ENST00000550592 FUT11Q495W5 492 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 GTDC1Q4AE62 458 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 KLHL10Q6JEL2 608 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 PSRC1Q6PGN9 363 aaPredicted RBP4.33□□□□□ -1.72
LIMA1-205ENST00000550592 SLC25A47Q6Q0C1 308 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 Q7L0L9 218 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 CUZD1Q86UP6 607 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 FAM89BQ8N5H3 189 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 CNBD1Q8NA66 436 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 SUSD6Q92537 303 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 TSSK2Q96PF2 358 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 BTBD9Q96Q07 612 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 IL36AQ9UHA7 158 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 NOCTQ9UK39 431 aaKnown RBP4.33□□□□□ -1.72
LIMA1-205ENST00000550592 PRDM4Q9UKN5 801 aa4.33□□□□□ -1.72
LIMA1-205ENST00000550592 FER1L6Q2WGJ9 1857 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 MKI67P46013 3256 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 TTC21BQ7Z4L5 1316 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 PCDH11XQ9BZA7 1347 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 FPGTO14772 594 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 EXTL3O43909 919 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 TRMUO75648 421 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 SERPINB2P05120 415 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 YES1P07947 543 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 DLATP10515 647 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 DNA2P51530 1060 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 ARHGAP1Q07960 439 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 ARHGEF16Q5VV41 709 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 KCTD9Q7L273 389 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 CARNMT1Q8N4J0 409 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 NIPA2Q8N8Q9 360 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 GBP7Q8N8V2 638 aaPredicted RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 SLC37A3Q8NCC5 494 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 APOBEC4Q8WW27 367 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 RBM41Q96IZ5 413 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 CCDC43Q96MW1 224 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 F2RL3Q96RI0 385 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 LPAR4Q99677 370 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 C17orf62Q9BQA9 187 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 PIGQQ9BRB3 760 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 CACNG6Q9BXT2 260 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 MRPL9Q9BYD2 267 aaKnown RBP4.32□□□□□ -1.72
LIMA1-205ENST00000550592 RNF121Q9H920 327 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 RAB9BQ9NP90 201 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 GMEB2Q9UKD1 530 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 ARID2Q68CP9 1835 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 PAPPA2Q9BXP8 1791 aa4.32□□□□□ -1.72
LIMA1-205ENST00000550592 SMCHD1A6NHR9 2005 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 PKD1L2Q7Z442 2459 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 NCOR1O75376 2440 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 MAP3K19Q56UN5 1328 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 USP42Q9H9J4 1324 aaKnown RBP4.31□□□□□ -1.72
LIMA1-205ENST00000550592 IGHV4-4A0A075B6R2 117 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 C13orf42A0A1B0GVH6 325 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 SNURFLB1AK76 121 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 IKBKBO14920 756 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 RTN2O75298 545 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 CDC123O75794 336 aaPredicted RBP4.31□□□□□ -1.72
LIMA1-205ENST00000550592 BAG2O95816 211 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 PATE4P0C8F1 98 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 UROSP10746 265 aa4.31□□□□□ -1.72
LIMA1-205ENST00000550592 CEACAM1P13688 526 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms